Gene Swoo_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2444 
Symbol 
ID6116718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2991577 
End bp2992566 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content42% 
IMG OID641633952 
Producthypothetical protein 
Protein accessionYP_001760817 
Protein GI170726791 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATAA CAAAGCTAAT TGATGAAGGC TTGTTCGATG AAGAGGCGCA AAAAGAGCAG 
TTTGCCATTG ATGTACTGAC GGGCTTATGT GCCAAACCTA AAAAGCTCTC AGCCAAATAT
TTTTATGATG ATGCCGGTAG TGAGATTTTT CAGCAGATCA CCCAACATGT CGATTATTAC
CCAACGCGTA CAGAGTTTGA AATTCTTGAT GCGATAAAAA ACGATATCCC TAAGGTGATT
GGCGAAGAGG AGATTGACAT CATAGAGTTG GGGGCGGGTG ATTGTCATAA GAGCAAGCTT
ATTCTCGATG GCTTTCTCAA TGCTGGGTGT AAAGTTAACT TCTACCCGAT AGATATCTCT
GAACAAGCGA TGATCTTGTT GCAGGATAAT ATCGCATCAC ACCCGAATTT GACCGTACAC
GGCGTGGTTG CAGAATACTT TGATGGTTTA CGTCTGGTAC GGAAAAAGTC GAGTAACAAA
CAGCTAGTGC TCTTTTTAGG CTCAAACATA GGCAATTTTG ACCGAGTGCA AAACCAAGGT
TTTTTAAGAC GGCTTTGGAT GAGTCTCAAC GCTGGTGATT TTGCATTACT TGGTTTCGAT
CTGAAAAAAG ATGTCGGCGT GTTGACCGCC GCCTATAACG ACTCAAGTGA GCTAACCAAG
GCATTTAACC TTAACTTACT CACACGCATC AATAGAGAGT TAGGTGGCAA TTTTGATATT
GAAAAGTTTC AGCACTTTGG GGTCTACAGC CCGATTTTAG GGGCCATGGA GAGCTATGTG
CTGGCCACTG AAACGCAGGA TGTCTATATC TCAGAGCTTA AACGTTCTTT TCATTTTGAA
GCTTTTGAGC CAATACACCT TGAGTTTTCC TTTAAGTTTT TAAAGAGTGA TATTGAGTAC
ATCTGCCAGA AGAGTGGTTT TACGCCCCTT GAACACTTTA CCGATCCTAA GGAATATTTT
ATGGATTCAC TCTGGCAGGT GAAGAAATAG
 
Protein sequence
MEITKLIDEG LFDEEAQKEQ FAIDVLTGLC AKPKKLSAKY FYDDAGSEIF QQITQHVDYY 
PTRTEFEILD AIKNDIPKVI GEEEIDIIEL GAGDCHKSKL ILDGFLNAGC KVNFYPIDIS
EQAMILLQDN IASHPNLTVH GVVAEYFDGL RLVRKKSSNK QLVLFLGSNI GNFDRVQNQG
FLRRLWMSLN AGDFALLGFD LKKDVGVLTA AYNDSSELTK AFNLNLLTRI NRELGGNFDI
EKFQHFGVYS PILGAMESYV LATETQDVYI SELKRSFHFE AFEPIHLEFS FKFLKSDIEY
ICQKSGFTPL EHFTDPKEYF MDSLWQVKK