| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2320 |
|---|
| Symbol | |
|---|
| ID | 6116591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 2849327 |
|---|
| End bp | 2851147 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641633826 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760694 |
|---|
| Protein GI | 170726668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000141551 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA AAAAACCTGT ACTAATCGCT TTTGCCAGCA TGTTTTGTCA TCCGGTTTAC
TCAGCCGATT TCTATTTTGG TGAAGATAAA GATATAGCAT TACAGATCAA TTCGCAGCTC
TCACTGGGTG CCAGCTGGAG AATGACGGGG CAAGATCCTA CATTTATTGG CAATCAAAAT
GGTGGAACAG GCGCCACCAT GACCACAGAT GATGGCAACC TAAACTTTGA GAAACATGAT
ACCTACTCTC AAATAATCAA AGGGACAAAC GAATTCCTGC TTACACGGGA TAACTTCGGG
GCATTTGTTC GCATAAAATA CTGGTATGAC ACTGAGTTGT CTGATGGTGA TCGTCCACAT
GGTAACTCAG TAAACGGCTA CATACCCAAT ACACCATTGA GTGATGATGG CTTCGCTGAT
AACGCCAAGT TCTCAGGGAT CACCCTACTC GATGCTTATC TGTTTACACA AACAGAGATT
GGCGAAATGC CCTTAGATCT TAGATTAGGT CGACAGGTGA TTAGTTGGGG CGAAAGTACC
TTTATTCAGG GAGGGATCAA TTCTGTAAAC CCTTTTGATG TCAGTGCATT TCGCCGACCT
GGAGCGACAT TAAAAGAAGC TTACCTGCCT GTTGGCATGT TTTACGCGTC TCTTGGGGTC
ACTGAATCAC TCTCTGTAGA AGCCTTCTAC CAATTTGAGT GGGAGAAGAC TCAGATTGAT
GGTTGTGGAA CCTTGTTTTC AAGTGGCGAC TTTGTTGCCG ACGGCTGTAA TGCTGTCACC
ATTAGTGTTA ATGACCGAGC AGCACTTGAG GGAGGCTTCT ATGCAAAACG CAGAGATGAT
GTGGAACCCG ATGACATAGG TCAATACGGT TTATCTCTAA AATACTACTC CGAAGCCCTT
AATGACACAG AGTTTGGGCT TTATTACCTC AATATCCACT CCCGTGTTCC CATGATTAAC
GCCGTACGTA GTGCTACTAC AACGATCCCT GGTGTCACGG ATGTATTTAT TCCGAGCTCA
TTGGATCCTA CTGGTGGAAG CATTTCAGCA CTGAACCCTG CTTATCAGGT TGAGTTCCCA
GAAGATCTAC AATTTTTTGG GGCAAGTTTC GCCACCAATA TAAAAGGCGT TGCCGTATCA
GGTGAGATCT CATACAAGCC AGACTCTCCG GTACAGATTA ATGGTGCAGA GATCCTCAAT
GGCGTACTCA GTGAATCACC CATTTTTCGT TATACACCGC GAGTGCTAGC AACAGAGAAA
GGCGGTGTGG CCAAAGGTTA CGATGAGTTT GATGTGACTC AAATTCAGTT AACCGGTATT
CAGTTTATTG AACAGTTTAT GGGGGCATCA AGGTTATCTC TGATAGGCGA GATAGGCTTT
GTTCATACCG ACGGTGTGGA GGACTCAAAC CAAAGGTATG GCCGTAACAC TGTTTTTGGT
TTAGCCAATT TCGATCTCGG CAATGGAATA AACTGTACTA ATTTAGTGGC CGCAGGCGCC
ATAGGCTCAG ATTGTCAGGA TGAAGGTTTT ACCACTGACA CCGCATGGGG TTATCGCTTA
AATGCCGTAT GGGAATACCC TGATTTAGTC GCTGGGATCT CTTTTAAACC AACACTGTCT
TGGTCACATG ACGTTGATGG CAACTCACCA GCACCAGGGC AGCAGTTCAA TGAAGGAAGC
CGAGCAATAG GCATAGCATT AGAAGCCTCA TACCTTCAAA AATACGCCAC AACTTTAAGC
TACAAATCCT TTTCCGGTGG TAGCCATAAC ACACTACAAG ATAAAGATTT CTTAGCTCTT
AGCCTAGATA TCTCCTACTA A
|
|---|
| Protein sequence | MKLKKPVLIA FASMFCHPVY SADFYFGEDK DIALQINSQL SLGASWRMTG QDPTFIGNQN
GGTGATMTTD DGNLNFEKHD TYSQIIKGTN EFLLTRDNFG AFVRIKYWYD TELSDGDRPH
GNSVNGYIPN TPLSDDGFAD NAKFSGITLL DAYLFTQTEI GEMPLDLRLG RQVISWGEST
FIQGGINSVN PFDVSAFRRP GATLKEAYLP VGMFYASLGV TESLSVEAFY QFEWEKTQID
GCGTLFSSGD FVADGCNAVT ISVNDRAALE GGFYAKRRDD VEPDDIGQYG LSLKYYSEAL
NDTEFGLYYL NIHSRVPMIN AVRSATTTIP GVTDVFIPSS LDPTGGSISA LNPAYQVEFP
EDLQFFGASF ATNIKGVAVS GEISYKPDSP VQINGAEILN GVLSESPIFR YTPRVLATEK
GGVAKGYDEF DVTQIQLTGI QFIEQFMGAS RLSLIGEIGF VHTDGVEDSN QRYGRNTVFG
LANFDLGNGI NCTNLVAAGA IGSDCQDEGF TTDTAWGYRL NAVWEYPDLV AGISFKPTLS
WSHDVDGNSP APGQQFNEGS RAIGIALEAS YLQKYATTLS YKSFSGGSHN TLQDKDFLAL
SLDISY
|
|---|
| |