| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2304 |
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| Symbol | |
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| ID | 6116575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2830267 |
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| End bp | 2830959 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641633810 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001760678 |
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| Protein GI | 170726652 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.652895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000448515 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAGTC AGTCACAAGA GAAAAGCGGT TCCTCTATCA AAGCCGTGCT TTTTGATCTC
GACGGTACCT TAGTGGATAC CGCCCCGGAT CTTGTTGCTG CTTTGAACCT GAGTTTAGCC
CAGTTCAACT GCCCCCAAGT CAGTTTGGAT AAGATGCGCC AAGTCGCTTC CGATGGCAGT
TTAGCACTTG TAAAGGCTGC TCAACCTCAT CTTAATGAAG ATAAGCAGTT TGAGCTACAG
CAGGGGCTAC TGCGCCATTA TACCCAGATA AATGGTCAGC ATAGCCAACT GTTTGATGGG
ATCTCTGCAT TACTTGCTTA CCTTGATGAA CACGCCATTC CCTATGGCAT AGTCACCAAT
AAACCCGCTC GTTTTACTCG CCCACTTCTT GATGTATTAG GGCTTTCGAT TTCAATGGGA
ACGGTTGTCA GCGGTGATAG CACTCTCTTC TCTAAACCTC ATATAGCACC CATGTTACTC
GCAGCGCAGC AGATAGATTG CCCTGCAGAG CAGATCCTCT ACTTAGGAGA TGCAGAGCGA
GATCTGCTCG CGGCTGACAA TGCAGGAATG CTAGGTGGCA TTGCCATGTG GGGATACATA
GGCTCAGATG CAACACCGCA AAACTGGCCA AGTAATTTTA CTTTTCATTC TCCACAAGAT
GTGGTTGAGC TTCTGGCACA ATTATCCAGC TAA
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| Protein sequence | MASQSQEKSG SSIKAVLFDL DGTLVDTAPD LVAALNLSLA QFNCPQVSLD KMRQVASDGS
LALVKAAQPH LNEDKQFELQ QGLLRHYTQI NGQHSQLFDG ISALLAYLDE HAIPYGIVTN
KPARFTRPLL DVLGLSISMG TVVSGDSTLF SKPHIAPMLL AAQQIDCPAE QILYLGDAER
DLLAADNAGM LGGIAMWGYI GSDATPQNWP SNFTFHSPQD VVELLAQLSS
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