| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2303 |
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| Symbol | |
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| ID | 6116574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2827554 |
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| End bp | 2829842 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633809 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001760677 |
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| Protein GI | 170726651 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00675695 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAGCA ATCTGAAAGT CACCAAACGT AGTGGCGAAC GCGAAATCAT CGATCTCGAT
AAAATACACC GTGTGATCAC ATGGGCAGCC AAAGACCTAA AAAATGTATC GGTATCAGAA
GTTGAACTTC GCTCTCACTT ACAGTTTTTT GATGGCATAC CGACAGAAGC TATTCATGAG
ACCATTATTA AAGCCGCAGC CGATCTTATC TCTCCAGAGT CACCTGATTA CCAGTTTCTT
TCGGCTCGTT TAGCTATCTT CCACCTGCGT AAAAAAGCGT TTGGCCAGTT TGAGCCACCT
AAGCTTTATG ATCACGTAGT TAAACTCGTT GAAATGGGTA AATATGATAC CCATATTCTG
CAAGACTATA CCCGTGAAGA GTTAGATATA TTAGATGGTT ATATCGATCA CTGGCGTGAT
ATGGACTTCT CCTATGCCGC TGTAAAGCAG TTAGAGGGAA AATATCTGGT TCAAAACCGC
GTTACCCATG AAATATATGA GAGTGCACAG TTCCTCTATA TTTTGGTCGC GGCTTGTCTA
TTTGCTAAAT ACCCTCAAGA GACTCGTCTT GACTATATCA AGCGTTTCTA TGATGCGGTT
TCAACCTTTA AAATATCACT ACCAACGCCC ATTATGGCTG GCGTTCGTAC GCCTACGCGT
CAATTTAGCT CATGTGTATT AATTGAGTGT GGTGATAGCC TAGACTCCAT TAACGCGACC
TCATCTTCTA TCGTGAAGTA TGTCAGTCAG CGTGCTGGGA TCGGTGTCAA TGCAGGGCGT
ATTCGCGCCT TAGGTAGCCC AATCCGTGGT GGTGAAGCTT TCCATACTGG CTGTCTGCCC
TTCTTTAAGT ACTTCCAAAC TGCGGTAAAG TCTTGCTCGC AAGGTGGCGT ACGTGGAGGA
GCTGCAACTC TCTTCTACCC GATTTGGCAT CTTGAAGTCG AGTCTCTGTT AGTACTTAAA
AACAACCGAG GGGTTGAAGA TAACCGTATT CGTCACTTAG ATTACGGCGT ACAGATCAAC
AAGCTAATGT ATCAACGTCT CATTCAAGGC GGCGTGATCA GCCTATTTAG TCCATCGGAT
GTACCGGGCC TTTATGATGC TTTCTTTGAA GACCAAGATG AGTTCGATCG TCTTTACCTA
CAATATGAAG CAGATGACAG TATTCGTAAA AAGCAAGTTA AGGCCTCTGA ACTCTTTGGT
TTGATGATGC AAGAGCGTGC CTCTACTGGC CGTATCTATG TACAGAACGT CGATCACTGT
AACACTCACA GTCCATTTGA TAGTAAAGTT GCACCAATCA GACAGTCTAA CTTATGTCTT
GAGATCGCAC TGCCAACTAA GCCTCTGGAT AATGTGAATG ATCCAAACGG TGAGATTGCA
CTTTGTACTC TATCGGCTCT TAACCTTGGG GCGATCAAGA ACCTTGCAGA GCTTGAACCA
CTAGCAGATC TTGCGGTTCG TGCCCTTGAC AACCTATTGG ATTATCAAGA TTACCCGCTG
ATCGCAGCTC AAAAGTCGTC AATGAATCGT CGAACTCTGG GTATAGGTGT GATTAACTTT
GCTAATTATT TGGCTAAAGA GGGAGTGCGT TACTCTGATG GCTCAGCAAA CAACATCACC
CATAAGACAT TTGAAGCGAT TCAATATTAC CTATTGAAAG CCTCGATGAA CTTGGCTAAA
GAGCAAGGTG CATGTCCAGC ATTCCATGAG ACAACCTATT CGAAGGGCGT ATTGCCTATC
GATACCTATA AACGTGCTCT GGACAATATT TGTGATGAGC CACTGCACAT GGATTGGGAG
ACACTGCGTC AGGATATCGT GACTCACGGC CTGCGTAACT CTACCCTTTC AGCATTGATG
CCATCTGAGA CATCCTCACA GATCTCCAAT GCAACCAATG GTATCGAGCC ACCACGTGGA
CTTATCAGCG TGAAGTCGAG CAAAGATGGT CAACTTAAGC AGGTTGTTCC TGATTTTGAG
AAGTACCAGT ACAGCTATGA GTTACTTTGG CAGATGCCAA ATAACGACGG TTATTTACAA
CTCGTTGGTC TAATGCAGAA GTTTGTCGAT CAGGCCATTT CCGCTAACAC AAACTATGAT
CCATCTCGTT TTGATAATCA GAAAGTGCCA ATGCAGGTAC TGCTGAAAGA TCTGTTAAAT
GCCTACAAAC TTGGCGTGAA AACACTCTAC TATCACAACA CACGCGATGG CGCGTCAGAT
AAACACGATG ATATGGTCAG CGTTGAGAAA GAAGACGATG ACTGTGCTGG CGGCGCGTGT
AAGATCTAA
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| Protein sequence | MNSNLKVTKR SGEREIIDLD KIHRVITWAA KDLKNVSVSE VELRSHLQFF DGIPTEAIHE
TIIKAAADLI SPESPDYQFL SARLAIFHLR KKAFGQFEPP KLYDHVVKLV EMGKYDTHIL
QDYTREELDI LDGYIDHWRD MDFSYAAVKQ LEGKYLVQNR VTHEIYESAQ FLYILVAACL
FAKYPQETRL DYIKRFYDAV STFKISLPTP IMAGVRTPTR QFSSCVLIEC GDSLDSINAT
SSSIVKYVSQ RAGIGVNAGR IRALGSPIRG GEAFHTGCLP FFKYFQTAVK SCSQGGVRGG
AATLFYPIWH LEVESLLVLK NNRGVEDNRI RHLDYGVQIN KLMYQRLIQG GVISLFSPSD
VPGLYDAFFE DQDEFDRLYL QYEADDSIRK KQVKASELFG LMMQERASTG RIYVQNVDHC
NTHSPFDSKV APIRQSNLCL EIALPTKPLD NVNDPNGEIA LCTLSALNLG AIKNLAELEP
LADLAVRALD NLLDYQDYPL IAAQKSSMNR RTLGIGVINF ANYLAKEGVR YSDGSANNIT
HKTFEAIQYY LLKASMNLAK EQGACPAFHE TTYSKGVLPI DTYKRALDNI CDEPLHMDWE
TLRQDIVTHG LRNSTLSALM PSETSSQISN ATNGIEPPRG LISVKSSKDG QLKQVVPDFE
KYQYSYELLW QMPNNDGYLQ LVGLMQKFVD QAISANTNYD PSRFDNQKVP MQVLLKDLLN
AYKLGVKTLY YHNTRDGASD KHDDMVSVEK EDDDCAGGAC KI
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