Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2277 |
Symbol | |
ID | 6116547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2793125 |
End bp | 2794162 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633784 |
Product | succinylglutamate desuccinylase |
Protein accession | YP_001760653 |
Protein GI | 170726627 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2988] Succinylglutamate desuccinylase |
TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00519502 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTACAAG CACTAAAAGA GTCTAAAGAC TTTTTACAAC TTACACTCGC CCAACCACAA CATTTCGATG AAACATTCAC ATTTATGCTT GGCTCTCATA CTCAAGTGGA AGTATGGGAT ACTGGAGTTA TTGTGTTTGA ACCTAAGGTC GCTCGGGGGA AAGACATTGT ACTCTCATGT GCTGTACACG GTAATGAAAC CGCGCCTATA GAGTTATGTA ACGGACTGAT AAAGTCACTG CTTGAAGAGA GGTTAATTGC GGAGCAAAGG GTACTTTTTC TTTTTGGTAA TCCGCCAGCC ATCATCAATG GCACCCGCTT TATTGATGAA AACCTTAATC GCCTGTTTAA CGGAGCTCAC TCTGTGGGTG AAGGGTTAGT TAACCCTGAA CGTATTAGAG CAAAGAAACT TGAGTTTTAC GTTGATAAGT TTTTTAGTTC ATCAAAAGAT AACAGCCATA AAATTCATTA CGATCTTCAC ACCGCTATCC GTGGTTCTAA ACACGAAAAA TTCGCTATCT ACCCATACAG ACCAGGTCGT AAGTACAGTG GTGAGCAGAT CATGTTTCTT GAAGCATGCG GTATCGATAC TGTGTTATTT CATCATGAGC CCACCACAAC ATTTAGCTAC TTTTCATCCC TTAATTATCA AGCCGATGCA TTTACCATTG AGTTAGGCAA AGTGCTTCCA ATGGGTCAAA ATGATATGAC GCGCTTTATC GCGCTCAACG AGATGCTTAG CCGCTTAATC GGCAATAAGT CCTTAGAACT GCCAGATTTT AATGCTAAAA CGGTGAATCT GTATCAAGTG TGTCGAGCAA TTAATAAAGG CTTTGATGAT TTTGAGTTTA CTTTCGCCAA TGATGTAGAA AATTTTACCT CATTCCCTAA GGGCTATATT TTAGCCAAAG AGGGCGGGGA GAACATCAAG GTTGAACATG AGGTTGAAGC CATCGTCTTC CCTAATGCCA AGGTACCAGT GGGCCAACGA ACGGTTTTAT GTTTAAAGCC TGCCTCTACT GAGAATATAG ACGGTTAA
|
Protein sequence | MLQALKESKD FLQLTLAQPQ HFDETFTFML GSHTQVEVWD TGVIVFEPKV ARGKDIVLSC AVHGNETAPI ELCNGLIKSL LEERLIAEQR VLFLFGNPPA IINGTRFIDE NLNRLFNGAH SVGEGLVNPE RIRAKKLEFY VDKFFSSSKD NSHKIHYDLH TAIRGSKHEK FAIYPYRPGR KYSGEQIMFL EACGIDTVLF HHEPTTTFSY FSSLNYQADA FTIELGKVLP MGQNDMTRFI ALNEMLSRLI GNKSLELPDF NAKTVNLYQV CRAINKGFDD FEFTFANDVE NFTSFPKGYI LAKEGGENIK VEHEVEAIVF PNAKVPVGQR TVLCLKPAST ENIDG
|
| |