Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2275 |
Symbol | |
ID | 6116545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2790637 |
End bp | 2792289 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633782 |
Product | phosphoglucomutase |
Protein accession | YP_001760651 |
Protein GI | 170726625 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0033] Phosphoglucomutase |
TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00864716 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCATTC ATGAACGTGC AGGGCAGGTA GCTTTACAAA AGGATTTGGT GAATATTCCA AAGTTGATGA GTCACTATTA TCGGTTAACG CCAGATAGCA AGATAGACAC TCAAAAAGTC ACTTTTGGTA CATCAGGGCA CAGAGGCTGC GCCTTATCGC GAAGTTTTAA TGAGCAACAC ATTCTTGCAA TCGTGCAAGC CGTTGTCGAT TACCGTTCAG GTGCAGGGAT CACAGGAGCC CTTTATCTAG GCATAGACAC ACACGCGTTA TCTCAAGCTG CATTTATTAC GGCGATTGAA GTACTGGTGG CTAATCATGT GCAGGTCATT GTTCATAAAG ATGATGGCTT TACACCGACC CCTGTTGTCT CCCATGGGAT CATTACGGCT AATAAGCACA GTGAAATACT TGCTGATGGG TTAATTATTA CACCATCACA CAATCCACCA CAAGATGGCG GTATTAAGTA TAACCCCCCT CATGGTGGTC CAGCAGAGGG TGAGATCACC CAGTGGATTG AAGATAGAGC CAATCATTAT CTTGCACAGA ATTTAGCAGG GGTTAATCGC CTTGATTACA CCCAATCTAT GCAGAGTCAT TTAGTTCAAG AGGTGGATTT AATCGCACCT TATGTTGATG ATCTAATTAA TGTTATTGAT ATGGATTCCA TCAAGAAAGC AAAAGTGAGA TTGGGCGTTG ATCCACTTGG AGGCTCAGGG ATCCATTATT GGGCAGAAAT CGCTAAACGC TACGACCTTG ACATTACGTT AGTGAACAAG AGTATTGATC CAAGTTTTGG ATTTATGCCG CTGGATAAAG ATGGCAAGAT CCGCATGGAT TGCTCATCTC CCTACGCGAT GTCTGTTTTA TTAAAGCACA AAGACAATTT TGACCTATGT GTAGGTAATG ATCCTGACTA CGATCGCCAT GGCATCGTTT GCCCAGGCTC TGGCCTAATG AATCCAAATC ACTTCTTAGC GGTGGCCATT GACTATCTGG TAACCCATAG ACCTCAGTGG TCTAAATCCT TAGTGATTGG TAAAACGTTA GTTTCTAGTG CCATGATAGA TAAGGTGTGT GAACAACATC AACGTGTGAT GAGTGAAGTT CCTGTTGGGT TTAAGTGGTT TGTTGATGGT TTAGCGCAGT CGACCTTTGC TTTTGGTGGC GAAGAGAGTG CTGGTGCGGC TTTTTTACGA CGTGATGGCA CCACTTGGTG TACCGATAAA GATGGCTTTA TTTTAGCCTT ACTGGCCGCA GAAATGTTGG CAGTCACCGG TAAAACACCT GCAGAGCGTT ATGATGAGCT GGTTGAACTT CATGGTGAGA GCTTTTATAC CCGCGTAGAT AGCCCTGTTA CAGCCGAGAA AAAAGCCAAG TTTGCCAAGA TTATTGCAGA AAATGTGGAT ACTAAGGTAT TAGGTGACAC TAGGTTAGCA GGTGAAGCGA TCACAAGCGT ACTGACAAAG GCGCCAGGTA ATCAAGCCAA AATTGGCGGC ATTAAAGTTG TGACTAACAA TGCTTGGTTT GCTGCTAGAC CATCAGGTAC AGAAGCCCTA TTTAAGATAT ATGGCGAAAG CTTTGTTAGC CAAAAGCATC TTGATGAGGT GATTGCTCAA GCACAAGCCA TGATAGAGAC GATGTTAAGT TAA
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Protein sequence | MAIHERAGQV ALQKDLVNIP KLMSHYYRLT PDSKIDTQKV TFGTSGHRGC ALSRSFNEQH ILAIVQAVVD YRSGAGITGA LYLGIDTHAL SQAAFITAIE VLVANHVQVI VHKDDGFTPT PVVSHGIITA NKHSEILADG LIITPSHNPP QDGGIKYNPP HGGPAEGEIT QWIEDRANHY LAQNLAGVNR LDYTQSMQSH LVQEVDLIAP YVDDLINVID MDSIKKAKVR LGVDPLGGSG IHYWAEIAKR YDLDITLVNK SIDPSFGFMP LDKDGKIRMD CSSPYAMSVL LKHKDNFDLC VGNDPDYDRH GIVCPGSGLM NPNHFLAVAI DYLVTHRPQW SKSLVIGKTL VSSAMIDKVC EQHQRVMSEV PVGFKWFVDG LAQSTFAFGG EESAGAAFLR RDGTTWCTDK DGFILALLAA EMLAVTGKTP AERYDELVEL HGESFYTRVD SPVTAEKKAK FAKIIAENVD TKVLGDTRLA GEAITSVLTK APGNQAKIGG IKVVTNNAWF AARPSGTEAL FKIYGESFVS QKHLDEVIAQ AQAMIETMLS
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