Gene Swoo_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2266 
Symbol 
ID6116536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2783275 
End bp2783985 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content42% 
IMG OID641633773 
Producthypothetical protein 
Protein accessionYP_001760642 
Protein GI170726616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.116308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA TTGTGATACA TTCGCCAACA TATGAGTTTA GTCTTTTGGA CCATATGTCC 
TGCAACACTG AGGTGAATAT CCAGATCTTG GAACCAGATC AGGTGCTTCG TCTTCACTCG
CGTTTTATCG GTGTTGATCC CAAACGTATG ATAATTCTTG AGTTAGGGGG CGATGCTCAA
TGGCAGAAGG CGCAGAATTT TCTATTTATT GGCCAGGAAG TTATTGTTCG AATTATCAGG
AGTAATGAGC CTAAGGCTAA TGTACTAGCC TTTAAAAGTA AGATCCAGAG GGTGGAGAGG
AATCTTGGGT ACTGGCTCTT AATAGATTAC CCAGAAGAGC TGCAGAAAGT TGCATTGAGA
CATCAGTCTC GGCTTCCCAT TAGCCTTAGC TCTGCAATCG TTCCTGCAAA AGATAAAGAA
AACAGTCAAA AGGATAAGCC ACTAGCCTTG GGGGCATTAA AGGATATCTC TATAAAAGGA
GGGGCTTTTA TCAGCTCAGG GCTTAATATT ATTTTGTGTG AGGAGTCTTA CCTGTTGAAG
GTTGAATTGT CATCACAACT GGACACTGAA CTTGTGCCAA TTACCATTAA GAATATTTTG
CCTATCGAGC ATGATGATGA AGCATTTCAG TACGGTTTTA CAATCAACTG CTCTCAGGCT
AAAGCTGAGT CTATCGTGCA TAAACTGCTT ATGTGCCATC TGTTGAAGTA G
 
Protein sequence
MEKIVIHSPT YEFSLLDHMS CNTEVNIQIL EPDQVLRLHS RFIGVDPKRM IILELGGDAQ 
WQKAQNFLFI GQEVIVRIIR SNEPKANVLA FKSKIQRVER NLGYWLLIDY PEELQKVALR
HQSRLPISLS SAIVPAKDKE NSQKDKPLAL GALKDISIKG GAFISSGLNI ILCEESYLLK
VELSSQLDTE LVPITIKNIL PIEHDDEAFQ YGFTINCSQA KAESIVHKLL MCHLLK