Gene Swoo_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2265 
Symbol 
ID6116535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2782414 
End bp2783001 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content40% 
IMG OID641633772 
Producthypothetical protein 
Protein accessionYP_001760641 
Protein GI170726615 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.693233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATC TATTCGCCCA TCTTGCAAGA ATGAAATTAA TTCAACGCTG GCCACTTATG 
TATAACGTTC GTAGTGAAAA TGTCCAGGAG CATTCGCTAC AAGTCGCTAT GGTAGCCCAT
GCGCTAGCAA TAATTAGCAA TCAAAAATTT GGAACCAAGC TAAGTCCTGA CAGAGCTGCA
ACCGTAGCAA TCTTTCATGA TGCCAGCGAG ATTTTAACTG GTGACCTACC CACGCCGGTG
AAATATTTTA ATAAAGAGAT TGAGGCTGAA TACAAAAAGA TTGAAGCAAT TGCTGAGCAT
AGACTCCTCG AGATGGTTCC CGAAGAATTC CAGCAGGAGT ACCAACCACT CCTGTCAAGC
GAACATGCCG ATAGCGAATA TAAGTTGTTG GTAAAATCTG CCGATACTAT CTGCGCCTTC
CTGAAATGTC TCGAAGAACT TAGAGCAGGC AATAATGAAT TTAATACTGC AAGAAAACGT
TTAATTGAAT CATTAGATAA GAACCCTGAT CCTGCAGTTA AATATTTTGT CGACTGCTAT
GTGCCTAGTT TCAAACTAAG CTTAGATGAT ATCAATAAGT TACTTTAA
 
Protein sequence
MSHLFAHLAR MKLIQRWPLM YNVRSENVQE HSLQVAMVAH ALAIISNQKF GTKLSPDRAA 
TVAIFHDASE ILTGDLPTPV KYFNKEIEAE YKKIEAIAEH RLLEMVPEEF QQEYQPLLSS
EHADSEYKLL VKSADTICAF LKCLEELRAG NNEFNTARKR LIESLDKNPD PAVKYFVDCY
VPSFKLSLDD INKLL