| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2254 |
|---|
| Symbol | |
|---|
| ID | 6116524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 2767223 |
|---|
| End bp | 2768743 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641633761 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001760630 |
|---|
| Protein GI | 170726604 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATG CATATCCGGG TAGCGACAAT TCAATAGTTT CTTTTAAAGC GCAATATGAA
AACTTTATCG GTGGTAAGTG GGTACCGCCA GTAAAAGGCG TCTATTTTAG CAATACGACC
CCAGTTACCG GTGAAGAGTT TTGTAAAATA CCTCGCTCAT GCGCACAAGA TATTGAGCTT
GCATTAGATG CTGCTCACAG CGCTAAAGAA GCATGGGGCA ACACCTCAGT ACAAGAGCGC
TCAAACATCT TATTAAAGAT TGCCGATCGC ATCGATGAAA ATCTAGAGGC TTTGGCCGTC
GCTGAGACGT GGGATAACGG TAAAGCCGTA CGTGAAACCT TAGCTGCAGA TCTGCCATTA
AGCTCAGATC ATTTCCGCTA CTATGCAGGA TGTATCCGTG CTCAAGAAGG CACCCTGTCA
GAGATAGACA AAGACACAGT AGCTTACCAC TTCCATGAGC CACTAGGGGT TGTCGGTCAG
ATTATCCCCT GGAACTTCCC ACTACTGATG GCAGCATGGA AGCTAGCTCC AGCATTGGCT
GCAGGAAACT GCATTGTGCT TAAACCTGCT GAGCAAACCC CTGCGAGTAT TTTGCTGCTA
ATGGAGTTAA TTGAAGATCT ACTACCTGCT GGGGTACTGA ACGTAGTCAA TGGCTATGGT
AGAGAGGCCG GGGAAGCACT GGCCACCAGC ACTCGTATCG CTAAAATCGC CTTTACAGGC
TCTACGGCAG TAGGTGGACA CATCTTAAAA TGTGCAGCTG AGAACTTAAT CCCCTCTACG
GTCGAGTTAG GCGGTAAGTC ACCTAACATC TATTTTGGTG ATGTGACTCA GCATGAAGAT
GATTATCTTG ATAAGTGCGC CGAAGGTTTT GTATTAGGCT TCTTTAACCA AGGTGAGGTC
TGTACCTGTC CATCTCGCGC ATTAGTGCAG GAAGATATCT TCGATGAGTT TATGGCTAAA
GTGCTACAAA AAACCAAAGA GATCATACGT GGCAACCCAC TCGACACCAC CACTATGGTT
GGTGCTCAAG CATCCCAAGA GCAGTTTGAT AAGATCATGG GTTACTTGAA AATAGGCAAT
CAAGAGGGAG CAAAAGTATT AACTGGCGGC GATCAGGAAA ACTTAGAAGA CTCGCTTGGA
AATGGTTTCT ATGTACAACC GACTATTCTC CAAGGAGATA ACTCCATGAG AATCTTCCAA
GAGGAGATCT TTGGCCCTGT GATAGCGGTA ACCACCTTTA AAGATGAGGC TGAAGCGCTA
GCCATCGCAA ACGATTCAGC TTACGGTTTA GGTGCTGGTG TTTGGACACG TGATACTAAC
CTTGCCTACC GAATGGGACG AGGCCTACAA GCAGGACGTG TATGGACAAA CTGTTACCAT
CTCTATCCCG CTCATGCCGC ATTCGGTGGT TATAAGAAAT CCGGTATTGG TCGTGAGACA
CATAAGATGA TGCTAGATCA TTATCAGCAA ACTAAGAACC TGCTCGTGAG CTACAGTACT
AGCCCACTCG GTTTCTTCTA G
|
|---|
| Protein sequence | MIYAYPGSDN SIVSFKAQYE NFIGGKWVPP VKGVYFSNTT PVTGEEFCKI PRSCAQDIEL
ALDAAHSAKE AWGNTSVQER SNILLKIADR IDENLEALAV AETWDNGKAV RETLAADLPL
SSDHFRYYAG CIRAQEGTLS EIDKDTVAYH FHEPLGVVGQ IIPWNFPLLM AAWKLAPALA
AGNCIVLKPA EQTPASILLL MELIEDLLPA GVLNVVNGYG REAGEALATS TRIAKIAFTG
STAVGGHILK CAAENLIPST VELGGKSPNI YFGDVTQHED DYLDKCAEGF VLGFFNQGEV
CTCPSRALVQ EDIFDEFMAK VLQKTKEIIR GNPLDTTTMV GAQASQEQFD KIMGYLKIGN
QEGAKVLTGG DQENLEDSLG NGFYVQPTIL QGDNSMRIFQ EEIFGPVIAV TTFKDEAEAL
AIANDSAYGL GAGVWTRDTN LAYRMGRGLQ AGRVWTNCYH LYPAHAAFGG YKKSGIGRET
HKMMLDHYQQ TKNLLVSYST SPLGFF
|
|---|
| |