| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2251 |
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| Symbol | |
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| ID | 6116521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2763044 |
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| End bp | 2763793 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633758 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
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| Protein accession | YP_001760627 |
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| Protein GI | 170726601 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
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| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0593082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCT GGACTAAAGA AGAATTCGAA CAAAAACTCA AAGATAAAGG GTCGCTTTAC
CATATACACC ATCCCTACCA TAAGATGATG CATAAAGGTG AGTGCAGCGT TGAACAGATC
AGAGGTTGGG TTGCCAACCG CTTCTATTAT CAGATCAATA TTCCCGTTAA AGATGCAGCC
ATACTGGCAA ACTGTCGCGA TGTAAAAACT CGCCGCATGT GGATCCAACG TATAGTGGAT
CATGATGGTT CAATTGAAGA TAACACCTTA GGTGGTATCG AGGCTTGGCT AAAACTCGGT
GAAGCGGTGG GACTGAATAG ACAAGATATG CTAGATGAAA AGTATATCCT GCCAGGGGTT
CGGTTCGCGG TCGATGCCTA TGTGAATTTT GCCAGACGAG CCTCATGGCA AGAGGCGGCC
TGCTCATCAC TTACCGAGAT GTTTGCGCCA GAGATACACC AAAGTCGCCT TAATACCTGG
CCAGAAAACT ACCCTTGGAT AAAATCCGAA GGATTAAGCT ACTTTCAGAT GCGACTCTCT
CAAGCAAGGC GAGATGTTAA TCATGGCTTA GCGATCACTT TGGCACATTT TACGACCCGA
GAGCAGCAGG AGCATGCACT GAATATTTTG CAGTTTAAAC TCGATATTCT TTGGTCCATG
TTAGATGCAA TGACATTAGC TTATCAGTAT GAGCGTGCGC CCTATTCACA GCTTATTGAT
GCGCCTGTCT ATCATAAAGG GATCTTCTGA
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| Protein sequence | MQAWTKEEFE QKLKDKGSLY HIHHPYHKMM HKGECSVEQI RGWVANRFYY QINIPVKDAA
ILANCRDVKT RRMWIQRIVD HDGSIEDNTL GGIEAWLKLG EAVGLNRQDM LDEKYILPGV
RFAVDAYVNF ARRASWQEAA CSSLTEMFAP EIHQSRLNTW PENYPWIKSE GLSYFQMRLS
QARRDVNHGL AITLAHFTTR EQQEHALNIL QFKLDILWSM LDAMTLAYQY ERAPYSQLID
APVYHKGIF
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