Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2224 |
Symbol | |
ID | 6116494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2729675 |
End bp | 2730010 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633731 |
Product | hypothetical protein |
Protein accession | YP_001760600 |
Protein GI | 170726574 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000135732 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00484475 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAAAG TTAAGATATT TCAACTCCTA TTGTCATTTT TATCGGTTTG TGGCTGGTCT TTGGCTGTTT ACGCACTGAT AGTGTTTGAT AAAGCGAGAC CTGATAGGGC GGTTGGATAT TATTTGAGTA AAGGTTCTTC GGTTCGACTA GGTTGGGATC AAACTCATAC CATTGAACTT GAGTATGTTA TCTGGACCTG CGCTGCGATA AGTTTTATCA GCTTAGCCTT TAATTACTAC TTTGCTCATC ACAGTAAGAT GGGATACTGG TTTAATATTC CACTGCTATT GACCGCTTCG TTGGCAGCGG GTCTTTATGT GCGTTTCGTG GTGTAG
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Protein sequence | MKKVKIFQLL LSFLSVCGWS LAVYALIVFD KARPDRAVGY YLSKGSSVRL GWDQTHTIEL EYVIWTCAAI SFISLAFNYY FAHHSKMGYW FNIPLLLTAS LAAGLYVRFV V
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