Gene Swoo_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2163 
Symbol 
ID6116433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2656686 
End bp2657795 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content44% 
IMG OID641633673 
Producthypothetical protein 
Protein accessionYP_001760542 
Protein GI170726516 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAA CCCTATTTAA AGCCTCACTT TTATACACGA GTTGTTTGTT TATTCAATTT 
AACTCTTTAA ATGCCGCCGA AGTGACCCAG CTGGATCAAA GCTTGGTTCC AGTTGAAACC
CGTTCGGCCG CTGAGCGAAA TAAAGCCATC TCTTTAGGTC TTCAACACGT GATATTAAAA
AACTCAGGCT CTGCTGCTGC ATTGAGTAAT CCAAGTGTCA AGGCTAAGGT CAAATCGCCC
AACTCTCTTA TTAGGCAGTT TGGCTATGAT GAAGTGGATG GAGAGCTACT GCTCAAAGTT
AACTTTGATC ACAAGCGCAT ACTAGAACTA CTCCGTGAGG CTCAACTGCC CGTGTGGGGA
AAGCAACGCC CCTTAACTTT AGTGTGGTTG GTTGAAGAGA GTAGTGGAGA GCGGAAAATT
TTGAATGACG CTTCGCCTGT AGAGAGTCGA ACATTGTTTC AAAAAGATGC CGAAGCCAAA
GGGGTACCGC TGCTGTTTCC GCTGATGGAT CTTGATGACA ATATGCAGAT CTCCGTCAGT
GATGTGAGGG GAATGTTTGT TAATCAGATT GAGCTGGCCT CACAACGCTA TCAAGCCGAT
TACTTTGTTG TGGCGTCGAT GACCCCAAAT GCCGATGGCG TTGAGTATAG TGTTTCTCTG
TTTTCTAAGG GAGCAGAGCA AGGTGGAACA ACGCCTCTAG TGAGTAAGCA ACAACAGGTA
TCGGATACAG AAGCTGCCGT AAACGGCATT ATCTCTACTG TGAGTGAGTA TTACGTTAGT
CGATATGCTA TTGCAGATAG TGGTGAGCAA CTGACTAGTT CAGTTACATT TGTCGATATT
ACTGAAATGA AACAACTGGT TGCAATTGAA AAGTACCTTA AACAACTCAG CGCTGTAAAA
GCGGTTCATA TCTCGCAACT GCAGGGAACC AGCGTTAAAT ATGCGTTAGA ACTATTTGGT
ACTCTTGATG ACCTTCATCG TTTAATGGCT CTTGACCCAC GGATTATAGA GGCTAGTGGT
GGATATCAAG GTGATATTGG TCGTGATGAT AACCTCAATA GTTTAGATCC AGCCTTAGTT
AATGAGCTTG AATATCGCTG GCGCGGCTAG
 
Protein sequence
MLKTLFKASL LYTSCLFIQF NSLNAAEVTQ LDQSLVPVET RSAAERNKAI SLGLQHVILK 
NSGSAAALSN PSVKAKVKSP NSLIRQFGYD EVDGELLLKV NFDHKRILEL LREAQLPVWG
KQRPLTLVWL VEESSGERKI LNDASPVESR TLFQKDAEAK GVPLLFPLMD LDDNMQISVS
DVRGMFVNQI ELASQRYQAD YFVVASMTPN ADGVEYSVSL FSKGAEQGGT TPLVSKQQQV
SDTEAAVNGI ISTVSEYYVS RYAIADSGEQ LTSSVTFVDI TEMKQLVAIE KYLKQLSAVK
AVHISQLQGT SVKYALELFG TLDDLHRLMA LDPRIIEASG GYQGDIGRDD NLNSLDPALV
NELEYRWRG