| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2143 |
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| Symbol | rlmL |
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| ID | 6116406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2628811 |
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| End bp | 2630946 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633646 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_001760522 |
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| Protein GI | 170726496 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATT TCTTTGCTGC GGCTCCTAGG GGCTATGAAT ATGCGTTATC ACTTGAGTTA
GCGGACCTCG GTGCGTCTGA CATTAAAGAG AGTGTTGCTG GTGTTTACTT TTCAGCTTCG
CTCGAGTTGG GATATCGAAT TACCCTTTGG TCAAGAATTG CTAGTCGGAT AATTTTTGTT
ATCCATAAAG GACCATGTGA ATCGCCTGAG CAGCTTTACA ATGCCGCATA TGGCATTGAT
TGGCAGATGG AGTTCAACCA CCGCAGCACA TTTAGTATCG ATTTTCACGG TATGGGTGGC
TTTATTAATA ACACCATGTT TGGTGCACTT AAAATTAAGG ATGCCATCGT TGATCGCTTC
CGTGATGATG ATTGCCCAAG ACCAGACGTA GCTCGTGTCG ATGCGGATTT TAGAATTGAT
GCACACTATC GCCGCGGTCA AATCACCATT GGTTTGAACT TTTCAGGCCC TGCACTGCAC
AAACGTGGTT ACCGTGACAT AACGGGTGAA GCACCACTTA AAGAAAACCT CGCCGCTAAT
ATGTTGATGC GAAGTGGATG GCAGAAAAAT CCAGTTTCCT TGTTAGATCC ATTCTGCGGT
AGTGGTACGA TTTTAATTGA AGCCGCCATG ATGGCCTGCG ATATGGCCCC TGGTCTTCAT
CGGGAGCGTT TCGGTTTTGA ACATTGGCTG AGACACAATG ATAAATACTG GCAAGAGCTG
CTGGACGAAG CAAAGGCGAG GGCATCGATA GGTATTACAC GCTGTAAAAC TAAATTTTAT
GGCTCGGATA TCGACTCACG TATTGTGGCA CTTGCAAAAA AGAATGCCGC AAATGCTGGT
GTCTTGGAGT TAATCGATTT TAGTGTTACT AACGCATTAA ACGTGAAAGT ACCTGAAGAG
ACTGGCTATC TCATTACCAA TCCACCTTAT GGTGAACGAT TAGGCACAGT GACAGCATTA
CTGCAGTTGT ATTATCAGCT TGGTGATAAG TTTAAAGCTG AATTTGGTGG CTGGAATCTT
GCTGTTTTGA ACAGCGATGT AGAGCTATTG TCTGCGTTAA AGTTAAAAGC AGATAAACAG
ATGAAGATGA ATAATGGTGC GCTAGAGTGC GCCTTTAATC TCTATACTGT TCATGCTACA
AATACGCGAC GTGTTGATCC AAGTAATATC AATCGTGAAG GTGATGTGAG TGATATTGCA
GTGCCTTTTG TGAACCGGGT AAAAAAGAAT ATTAAGCAGC TACAAAAATG GGCTAAGAAA
GAGGGGATTG ATAGCTATCG TATCTATGAT GCTGATCTAC CCGATTACAA AGTTGCCATT
GATAAGTACT TAGATTACGT TGTGATCCAA GAATATACTG CACCTGTCGA TATCCCTGAG
TCTGTCACTA AACGTCGATT AACAGATGTA CTTATCACTC TACCGGGGGC GATCGGTATC
GATCCCAATA ATATTATTTT AAAAACCCGT GAGAAGCAGA AAGGCACTAA CCAGTACGAG
AAGATCCAAG CAAACAAGCT TGAGCTTATT ACCACTGAGT ATGGCGCTAA ATTTAAGTTA
AACCTTAAAG AGTATTTAGA TACAGGTCTT TTCTTAGATC ACCGCCTAAC GCGTAAATTA
GTGGGTGAAA AATCCAAAGA TCGTGATGTA TTGAACCTGT TTGCATACAC AGGAACAGCC
TCTGTCCATG CCGCTCTAGG TGGGGCTAAG TCGGTAAAGA CTGTCGACAT GTCTAATACC
TATACAAACT GGGCTAAAGA AAACTTTGCT TTAAACGGTT TAAATGATGA TAAGTATCAG
TTTGTTCAAG CTAACTGTAT GCAGTGGATT AAAACCACTC ACGATAAGTT TGACCTGATT
TTTATCGATC CACCGACATT CTCTAACTCT AAGAGAATGG AGGACTCTTT TGATGTGCTA
CGTGATCATG TGCCTCTTTT ATCGAGTCTA ATTAAGCTAT TAAACCCTAA TGGTGAGATT
ATTTTCTCAA ATAATAAGCG CAAGTTTAAG ATGGAAATCG AAGCATTAGA AGCCTTGAAC
TTTACCGTTA AGAACATAGA TAACCAGACA CTTCCTCTGG ACTTTAAACG TAACCCGCAG
ATCCACAATA CCTGGTTGCT TACCCATGGC GGATAG
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| Protein sequence | MLNFFAAAPR GYEYALSLEL ADLGASDIKE SVAGVYFSAS LELGYRITLW SRIASRIIFV
IHKGPCESPE QLYNAAYGID WQMEFNHRST FSIDFHGMGG FINNTMFGAL KIKDAIVDRF
RDDDCPRPDV ARVDADFRID AHYRRGQITI GLNFSGPALH KRGYRDITGE APLKENLAAN
MLMRSGWQKN PVSLLDPFCG SGTILIEAAM MACDMAPGLH RERFGFEHWL RHNDKYWQEL
LDEAKARASI GITRCKTKFY GSDIDSRIVA LAKKNAANAG VLELIDFSVT NALNVKVPEE
TGYLITNPPY GERLGTVTAL LQLYYQLGDK FKAEFGGWNL AVLNSDVELL SALKLKADKQ
MKMNNGALEC AFNLYTVHAT NTRRVDPSNI NREGDVSDIA VPFVNRVKKN IKQLQKWAKK
EGIDSYRIYD ADLPDYKVAI DKYLDYVVIQ EYTAPVDIPE SVTKRRLTDV LITLPGAIGI
DPNNIILKTR EKQKGTNQYE KIQANKLELI TTEYGAKFKL NLKEYLDTGL FLDHRLTRKL
VGEKSKDRDV LNLFAYTGTA SVHAALGGAK SVKTVDMSNT YTNWAKENFA LNGLNDDKYQ
FVQANCMQWI KTTHDKFDLI FIDPPTFSNS KRMEDSFDVL RDHVPLLSSL IKLLNPNGEI
IFSNNKRKFK MEIEALEALN FTVKNIDNQT LPLDFKRNPQ IHNTWLLTHG G
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