| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2122 |
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| Symbol | |
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| ID | 6116385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2597832 |
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| End bp | 2598527 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633625 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001760501 |
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| Protein GI | 170726475 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00660884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0855219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGCA TCGCCATTGT GGAAGATGAA GCAGCCATAC GAGAAAATTA TAAAGAGGTA
CTACAGCAGC AAGGCTATAG CGTTCAGGCA TACGCAAATC GTCCCAGTGC CATGCAGGCA
TTTTCCACCC GTTTACCCGA CTTGGCCATT ATTGATATCG GTTTGGAGGA TGAGATTGAT
GGCGGCTTTA CCCTTTGCCA ATCCCTTAGA GCCATGTCTA GCAACCTACC CATTATCTTT
TTAACCGCCA GAGACAGCGA CTTTGATACC GTCTGTGGCC TACGTTTAGG AGCCGATGAC
TACCTGAGTA AAGATGTGAG CTTTCCTCAC TTAATCGCCC GACTAGCCGC GCTGTTCAGG
CGAGCCGAAC TGCAGGGAAA ATCACTCGAA GTCGAAAACC TACTCGAAAG AGGCGCCCTA
ACCATTGACG CGAATCGTAT GCAAGTTTTT TGGAATCAAG TGCCAATAGA GCTCACTGTC
ACTGAATTTT GGATGGTACA TTCACTGGCA AAGCGACCAG GACATGTTAA AAACCGCCAA
GACTTGATGC AGGAGGCTAA GATATTTGTC GACGACAGCA CCATCACCTC CCATGTAAAA
AGAATAAGGA AAAAATTCAT CGCCCAAGAT GCTGAATTTG ATTGCATAGA TACGGTTTAT
GGCATGGGAT ATCGATGGGA GCCTCAAGTC AATTAA
|
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| Protein sequence | MKRIAIVEDE AAIRENYKEV LQQQGYSVQA YANRPSAMQA FSTRLPDLAI IDIGLEDEID
GGFTLCQSLR AMSSNLPIIF LTARDSDFDT VCGLRLGADD YLSKDVSFPH LIARLAALFR
RAELQGKSLE VENLLERGAL TIDANRMQVF WNQVPIELTV TEFWMVHSLA KRPGHVKNRQ
DLMQEAKIFV DDSTITSHVK RIRKKFIAQD AEFDCIDTVY GMGYRWEPQV N
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