| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2121 |
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| Symbol | |
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| ID | 6116384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2595585 |
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| End bp | 2597762 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633624 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001760500 |
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| Protein GI | 170726474 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.355217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.132598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACC TTCCTATTGG CCTAAGAACA AAAGTTGCCA TACTCTCTCT GTTTCTGCTC
TGCCTCCCCT GGCTCGGCTA CCAATATGTC TGGGAGATGG AAAAGTACCT GCGCCATGGT
CAAGAGAAGA CCTTAGAGGG CACGACTCAA GCCCTTGCTA CCGCCCTGCA TGAGAGGCCT
AAACTATTTG ATAGTCAAGC CAGCTTTCTG ACTCAAGTAC AGCAAGGCAG AGATCTCTAC
GCCTACCCAC TCTCAGGTCC TATTCAATTA GATGGAAAGC TGGCTGATTG GGCACCTTAT
AGACATAAGA GTATAAATTA CGGCGACAAT CATCAGATAT TCAAAGCCGA TCCCGATGCC
CCCTTAAGCG TCAACTTTAC CCATATGGTT GGTAAATACG CAGGTTACCT CTATGGCTTC
TTTGAAGTCA CGGATCCCAA TGTAGTGTAC CGTGGCAAAA ATACCCTTAA TATCGATCGA
AATGACCATC TAGCTATCGC GACCTTGGCA CCCGATGGAA AATTCAGACG TTACATCGTC
GCTACGACAA AAGATGGTTG GATCAGCGCA TTTGAGCTGC CTGAAGATCC TGCCCTTTCT
ACCCCTGTCA CCCCTGAAAT TAAAATCCAG GGAAAATGGA AAAAAACAGA GCAAGGATAT
AATGTTGAGC TGCGTATCCC ACTGGAGATG GTGGGTAGCA AGCTGGGCTT TGCCATCTAT
GATGTTAACG ACAGCAAAAC GGGCGAACTT GAAGCAATTG TGGGCACCTC AGCCATTGAT
GATGTGAATA AACTGGGCAC AGTGCTTGTC CCCTCACCAG AGATAGAGAG CATCATTAAA
GGAATGAGTC ATAACAGCTC ACGGATCTGG GTGGTCGATA AACATGGCCG CGTGCTTGCA
AAATCAGGGG ATATTCGCAC CAGTAACAGT GTCTGGACTC GCACAGTTAA AGAGCCGACA
AACCCAGGGT TTTGGGAACA ATTTAAGCAA AAATACCTGC ATCCGCTCTA CTACCGGATC
TTAACCACGC CACCTAAAGA TTTTATCGAC TCTTTACAGG ACTCCACCGT CCTAGGCGGT
AGCCATATTA AACAAGCATT ATCGGGAAAA CAGGGATCGA CTTGGCGATT AACCCCCGAC
AATAAAGCAG TGATTTTAGC TGCTGCCAGT CCTATCTGGA TAGACGATAA GGTGATGGGA
GCCGTGATCT CAGAAGAGAC AACCCACGGG ATCAGAACCT TACGCAATAA AGCGTTAGAG
AAACTCTTTA ATGTCATCAT TACCATCATG AGCATGGGGA CATTAGCGCT GTTTTTCTTT
GCATCAAGTA TCTCAAGCCG GATCCGAAAA CTCAGAGATG AAGCTGAAGA GGCCATCGAT
AGCCAAGGAC GAATCAAGCA ACACATAAAG GGCTCTAAAG TCCGTGATGA GATAGGTGAT
CTCTCCAGAA GTTTTGCCAA TATTGTTGGC CGTTTAGGGC AATACACTCA CTACCTTGAA
AACATGAGCT CACGGCTTTC ACATGAGTTA AGAACCCCCG TCGCCGTGGT TCGCTCTTCA
CTGGAGCATC TTGGATTGCA ATCACTCGAT CCTGACAGCC GTAAATATGT TGATCGGGCA
CAAGAAGGGG TAAGTAGACT CAATATGATC TTAAATAATA TGAGTGAAGC TACCCGACTG
GAGGAGAGTT TATCTAAAGC CGAGCTTGAT ACTTTCCCTC TCTCAAAAGT GATTAGTGGT
TGCGTTCAAG GTTATCAGCT CACCTACCCC AATAAAGAGT TCATCACAGA GATCTCAGAT
GAGGATTTGA TGATGACAGG GGTACCTGAA TATATAGCCC AGCTAATGGA TAAACTCATC
GCCAACGCCC TAGAGTTCAG TTTAGAGAAT ACCCAAATCT CGGTTTCACT CTCGGCAAAA
AATCGCTTAG CTCAGCTCTC TATCCGTAAT CTAGGTCCAG AGTTACCAGA AAATATGGCA
GAGCAAATAT TTGAATCTAT GGTCTCTGTC AGGCAACAGA AGGCTCAAGA GAAACCACAC
CTTGGCTTAG GCCTCTACAT TGCAAGGCTA GTCACCGACT TTCACCATGG AAAGATCATC
GCCAAAAACC TCCCTGTAGA TGAAAATGAT AAATCAATCA CAGGTGTGGA GATACGGGTG
AGTTTGCCCC TTGATTAG
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| Protein sequence | MFNLPIGLRT KVAILSLFLL CLPWLGYQYV WEMEKYLRHG QEKTLEGTTQ ALATALHERP
KLFDSQASFL TQVQQGRDLY AYPLSGPIQL DGKLADWAPY RHKSINYGDN HQIFKADPDA
PLSVNFTHMV GKYAGYLYGF FEVTDPNVVY RGKNTLNIDR NDHLAIATLA PDGKFRRYIV
ATTKDGWISA FELPEDPALS TPVTPEIKIQ GKWKKTEQGY NVELRIPLEM VGSKLGFAIY
DVNDSKTGEL EAIVGTSAID DVNKLGTVLV PSPEIESIIK GMSHNSSRIW VVDKHGRVLA
KSGDIRTSNS VWTRTVKEPT NPGFWEQFKQ KYLHPLYYRI LTTPPKDFID SLQDSTVLGG
SHIKQALSGK QGSTWRLTPD NKAVILAAAS PIWIDDKVMG AVISEETTHG IRTLRNKALE
KLFNVIITIM SMGTLALFFF ASSISSRIRK LRDEAEEAID SQGRIKQHIK GSKVRDEIGD
LSRSFANIVG RLGQYTHYLE NMSSRLSHEL RTPVAVVRSS LEHLGLQSLD PDSRKYVDRA
QEGVSRLNMI LNNMSEATRL EESLSKAELD TFPLSKVISG CVQGYQLTYP NKEFITEISD
EDLMMTGVPE YIAQLMDKLI ANALEFSLEN TQISVSLSAK NRLAQLSIRN LGPELPENMA
EQIFESMVSV RQQKAQEKPH LGLGLYIARL VTDFHHGKII AKNLPVDEND KSITGVEIRV
SLPLD
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