| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2110 |
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| Symbol | |
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| ID | 6116373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2585378 |
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| End bp | 2587051 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633613 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001760489 |
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| Protein GI | 170726463 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000148173 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.593825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACAGA TTTGGATAGA TAATTTACCG GATGATGTAT CTAACGAGAT TGACGTTAAC
CGATATAACT CGCTGGTGGA GATGTTTGAG ACCTCAGTGT CTAAATATGC CGATCAACCA
GCTTTCGTCA ATATGGGCGC GACATTAACC TATCGTAAAC TTGAAGAGCG CAGTCGTGCT
TTTGCTGCGT ATCTGCAAAA TGATCTTAAG CTGGAAAAGG GTGACAGAGT CGCCATCATG
ATGCCGAACC TGCTGCAATA CCCCATTGCA CTCTTTGGGA TCTTACGTGC GGGCATGGTG
GTCGTTAACG TAAACCCTCT ATATACGCCA CGAGAGCTGA AACATCAGCT AAATGATTCC
GGTGCAAAAG CGATTGTTGT GGTATCAAAT TTTGCCCACA CCCTTGAGAA GGTTGTCGAT
CAAACTTGTG TCGAGAGCGT TATTTTAACA GGACTTGGGG ATCTTCTTAG TGCGCCTAAA
CGCACCTTAG TTAACTTCGT GGTTAAATAC ATTAAGAAGA TGGTGCCTAA GTACAATCTT
CCCCATGCGA TTTCGATGCG AAAAGCCTTA AGTAAAGGCA GACGCATGCA GTACGTGAAA
CCTAAGTTAG TCAACGATGA TCTTGCTTTT CTGCAGTATA CCGGCGGGAC AACTGGGGTC
TCTAAAGGTG CCATGTTGAC CCATGCAAAC GTGGTGAGTA ATCTGCTACA GGCAGATGCG
GCATACTCTC CTATGCTGAT TGATGGCAAA GAGTTTGTTG TCACAGCGCT ACCGCTTTAT
CACATCTTTG CTTTGACGGT GAACTGTCTG CTCTTTATGC ACAAAGGGGC AAATAACCTG
TTGATCACTA ACCCTAGGGA TCTCCCTGCA TTTGTTGGTG AGCTGAAAAA GCATCCATAT
ACGGCACTGA CTGGGGTTAA TACGCTTTTT AACGCCTTAG TTAACTCCGA AGAGTTTAAA
GATTTAGATT TTTCTCAGCT TAAACTGTCG ATTGGCGGTG GTATGGCGGT GCAACGCGCT
GTTGCGGATA AGTGGCAGGC TATCACTAAG ACTAAACTGC TTGAGGGCTA CGGTTTAACC
GAAGCTGCGC CTTTGGTGAC ATGTTGTCCT TATAACCTTG AAGGCTATAA CGGTTCTATC
GGCTTTCCTG TGGCGATGAC AGATATCCAG GTACGTGATG ATGAAGGAAA GGTCTTGCCC
CAAGGTGAGA TTGGAGAGCT GTTTGCTAAA GGGCCTCAGA TCATGAAAGG TTATTGGCAG
AGACCAGAAG AGACTGCTAA TGTTATCGAT ACTCAAGGTT ATCTAGCAAC CGGTGATATC
GGTTATATGG ATGAACAGGG ATTCTTCTTC ATTGTCGATC GTAAGAAAGA TATGATTCTA
GTCTCTGGCT TTAATGTCTT CCCTAATGAG GTGGAGGAGG TTGTTGCTCT ACATCCAAAA
GTGATTGAAG TCGCTGCGGT TGGAGTGCCT AATGAGCTTT GTGGTGAGTT AGTTAAGGTA
TTTGTCGTTA AAAATGATAA ATCTTTAAGC GAACAAGATC TCATCACACA TTGTCGTAAG
CATTTAACGG GATATAAAGT GCCTAAGCTG GTAGAATTTA GAGAAGAGCT ACCGAAATCG
AACGTGGGTA AGATCCTACG TAGAGAGTTA AGGGATGAAG TTAAGTCATC TTAA
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| Protein sequence | MEQIWIDNLP DDVSNEIDVN RYNSLVEMFE TSVSKYADQP AFVNMGATLT YRKLEERSRA
FAAYLQNDLK LEKGDRVAIM MPNLLQYPIA LFGILRAGMV VVNVNPLYTP RELKHQLNDS
GAKAIVVVSN FAHTLEKVVD QTCVESVILT GLGDLLSAPK RTLVNFVVKY IKKMVPKYNL
PHAISMRKAL SKGRRMQYVK PKLVNDDLAF LQYTGGTTGV SKGAMLTHAN VVSNLLQADA
AYSPMLIDGK EFVVTALPLY HIFALTVNCL LFMHKGANNL LITNPRDLPA FVGELKKHPY
TALTGVNTLF NALVNSEEFK DLDFSQLKLS IGGGMAVQRA VADKWQAITK TKLLEGYGLT
EAAPLVTCCP YNLEGYNGSI GFPVAMTDIQ VRDDEGKVLP QGEIGELFAK GPQIMKGYWQ
RPEETANVID TQGYLATGDI GYMDEQGFFF IVDRKKDMIL VSGFNVFPNE VEEVVALHPK
VIEVAAVGVP NELCGELVKV FVVKNDKSLS EQDLITHCRK HLTGYKVPKL VEFREELPKS
NVGKILRREL RDEVKSS
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