Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2016 |
Symbol | |
ID | 6116279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2477776 |
End bp | 2479134 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633519 |
Product | coenzyme F390 synthetase-like protein |
Protein accession | YP_001760395 |
Protein GI | 170726369 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.651292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGACC AAGTTGGTAT AACGATCAAT AAGCTCTCTG CAGTATTAAA ACGTCGAATT GAGATTTCGA ATGATGTAAT GAGCACGCTC AGTTTAAGTC GTGATGAGTT CAAGTTGTGG CAGGAACTGG CGCTGTTGAA TAACGTCAAA CATGCATGTT TGCACTCGCC TTTTTATCAA AACCATATTC CCAAGCAACT GGCTCAAGAG TTTATAAATG GTGATTTGAC CCGTTTTTCT AAACTGCCAT TTACTACCCG GGATGATTTG ATGAATCAAT ATCCATTAGG GCTATTATCA GTGCCAAAGG AGCAAGTAGT TCGCTTTAAT GAGAGCTCTG GTACATCTAA TGGCAAACCC ATATCAGCAT ATTTTACCCA AAAAGATTGG CTTACTAATA ACAATACTGT GGCCCACTTT CTCTCTTCGG TTCTGACTTC TAAAGACTGT GTGGCGCTTG CTGTTCCCTA CGAACTAGCA GGTATTGGGC AAGATTTAGA TCGTTCAATA GAGTTATTAA ATTGCTCTGT TGTTGCACTG GGAGCATTAA CGAAGTTTTG CCCGCCTGAG CGGATGGTCA ATATATTAAA AACTGCTGGG GTTACAACAC TTATCTGTTC AGGAACGCGA GCTCTCTATT TAGCTGATGT TGCCAAGGAG CAAGGGATAT GTCCCAAGTC TGAGTTAAAG GTAGACAAAA TACTGTTTGC TGGTGAAGGG GCATCAAAAG CGAAGCGTCG ATTGTTAGAG GAAACATGGG GGGCAAAAGT GTATGCCATG TATGGCATGA CGGAAACAAA TACTTTGGCC ATGTTCTGTA CTGAAAACAG ACTTCACTTG ATTGAAAACC GTAACTATTT CGAAGTAATT AATCCGACAA CTGGCTCTTT GCAGGAACGA GGTGAAAAAG GGGAGTTAGT GGTGACATCA CTCAGTTCAG AAGCGATGCC ACTAATACGT TATCGGACAG GAGATTTTTG TACGATTGAT GACTTGCCAT GCCGATGTGG TAGCCCATTT AGAGTGTTAA ATCATATGGG GCGTACAACT GATTTGATTA TGGTTGGTAG TAAGCCTATC AGTCAGTTGC AATTAGAAGA TGCAATCATG ATGCATCTGC CTTCGTCACC ATACTATTTC AGCTTTAAAG CAAAGAGTGA CAAATTGTTG ATAGGGCTAA CTTCCAACAA CATTCTGGAT ACTGTTCATA GCAATATCGC GCATGAGATT CTTCGACGAT TCGAGGTCTC TGTTGAGTTT ACATCGATAG CAAAAGAGAA GTTTGTACAC GCTTTAAGAA CTGCCGCAAA ACCAACGATG AATAACTTTT TGTTAGATGA TGAAGATGCC AATGAGTGA
|
Protein sequence | MSDQVGITIN KLSAVLKRRI EISNDVMSTL SLSRDEFKLW QELALLNNVK HACLHSPFYQ NHIPKQLAQE FINGDLTRFS KLPFTTRDDL MNQYPLGLLS VPKEQVVRFN ESSGTSNGKP ISAYFTQKDW LTNNNTVAHF LSSVLTSKDC VALAVPYELA GIGQDLDRSI ELLNCSVVAL GALTKFCPPE RMVNILKTAG VTTLICSGTR ALYLADVAKE QGICPKSELK VDKILFAGEG ASKAKRRLLE ETWGAKVYAM YGMTETNTLA MFCTENRLHL IENRNYFEVI NPTTGSLQER GEKGELVVTS LSSEAMPLIR YRTGDFCTID DLPCRCGSPF RVLNHMGRTT DLIMVGSKPI SQLQLEDAIM MHLPSSPYYF SFKAKSDKLL IGLTSNNILD TVHSNIAHEI LRRFEVSVEF TSIAKEKFVH ALRTAAKPTM NNFLLDDEDA NE
|
| |