| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1993 |
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| Symbol | |
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| ID | 6116256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2450292 |
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| End bp | 2452379 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641633496 |
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| Product | phosphoribulokinase/uridine kinase |
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| Protein accession | YP_001760372 |
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| Protein GI | 170726346 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0572] Uridine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0026662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAACA TAGCCTATTT CAATATTCCA TACTTTAAAA CAGGTCTATT GATACGGATA
GTATTAATAG TTTTCCTAGC CCCAGAAATC CAAACAGACT GGTTTCTGCC ATTTATTTCA
CACTTTATCG ACCAGCCCTC CTTTGATCCC TGGAGTGATT TTTTATTAGT TAATGAGAAT
TATCGAGCAT ACCCATATGG GTTTACTATG CTATTTTCAC ATACTCCACT TGTACTTTTA
GGCAGTTTCA TCGATGATTT TATAAAGCTT AGTTTCTTTG AAAATCTCGG GCTTAAGGCT
ACGATATTAA TCGCTGACTT CATTGTTTTT AGCCTATTAG TAAAACTTTA CCCTAACAAT
AGCGAAGCGA TAACAACTCT ATATTGGCTA TCTCCAATTG TATTGTTTGT TAATTATTGG
AATGGGCAAA CAGATATAAT ACCTGTTGCC ATTTTGCTCT ATGCTATTAC TCTCACCAAA
AAAAATCACA TGATTGCTTC AGGGCTCACA CTAGCTTTAG CTGTAACAGC AAAGCATAGT
ATGTTAATCG TCATTCCTTT TTTTGCTATT TATCTATATA AGAACAAAAG ATATAGAAGA
GCATTTTTTC CATTTTTATT TTCATTTTTT AGTGCTTTAG TATTACTGGT TATCCCAGCT
ATTTTTAGCT CAGGCTTCGT AGAAATGGTA CTAAACACTC CTGAAACTGA GCGCATATAC
CACTTTGCAA TACCTTTGGG ACCAGAAATA AATATTTATG TAACGCCAAT AATCTATGTC
CTTTTACTGT ATTCAATGTG GCGTATTTCA TGGATTAGCT TTGACGTATT AATGGCTAGT
ATTGGTCTAG GCTTTTTCGC ATTAATCCTC TTAACCCCCT CTCCTGTTGG CTGGTATCTA
TGGTTGCTTC CGTTTTTGAT CGGGTACTTA TTGAAGAAGA ATGAGTATTC GAACTTTTTA
TTCGGAACAT TTACATTCCT AATCATCTGC TACCATTCAA TGTTCTCATT TGGCGCACAG
ATAAATTACT TTGAATATGA TCTTATTTTC GAATTAGATA AAATGAGTTC ATATATGAAT
ATTCATAGTC GCTCTCTCTG GGTCACGTTA ATAACAACAT TTGGAGGACT GTTAAGTTGG
AGGTTACTAC GAGAAGAAAT ACTTAAGAAT AAAATATATT TAATAGGTAC AAACCCAATA
GCTATTGGGA TTTCAGGTGA TTCAGGTGCA GGTAAGGATA CATTTGGAGC ATCTTTGGCA
GGCCTATTTG GAAAGCACTC TGTCTCCTAT GTTTCTGGTG ATGATTACCA TGTATGGGAT
CGTTACGGCG GAATGTGGAA TGCACTTACC CACTTAAACC CCAGTGCTAA CTATATTCAT
AAATTTTGCA GAGATATCCT AGCTTTATTA GAAAGGAAAA GTATATATTG CAGAACATAT
GAACATACAA CAGGGCTTTT TTCTGAACCT AAGCTTCGCA AAGGCAATAA TGTATTAATA
GCTTCAGGTC TCCATACACT TTTTTCCAAA TCATTATCCG ATAAATTCGA TGTCAGAGTA
TTTCTTGAAC CCAGCGACCA ACTTAGATAT TTTTGGAAGT ACCAACGAGA TGTCAACGCT
CGTGGTAGTA ACATTGAAAG CGTCAGCGCT TCGTTAAAAA AACGTCAATC TGATGCTCAA
AGGTATATTC ATCCACAAAA AAAACGTGCA GATATTATTT TTCAACTTAT CCCTTTAAAT
CAAGATAATG TTTCTCCATT CAATCCTGAG CAAAATTTCG ATGACGTAAG GCTAAAACTA
CAGGTAACAA TTAAAGGTAG AGTCTACTAC GAACGCCTTT CAAAGGTATT GATAGGGTTA
TGCGGGATAT CATTAGAAAA ACATTTCACC AATGATAATG ATAACGTCAC ATTGACCATC
GAAGGGGATG TATTTGCAGA GGATATGTCA TTGGCTATTC AATCATTAAA CTTAACATTT
ACAGAACTAC TTGATATCTA CCCTGTATGG AAAGATGGCA TGCTTGGGTT GATGCAAATC
ATCACTATTC TGCATTTAGA TGAAACGATG AGGGTTAGAA AAAAATGA
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| Protein sequence | MKNIAYFNIP YFKTGLLIRI VLIVFLAPEI QTDWFLPFIS HFIDQPSFDP WSDFLLVNEN
YRAYPYGFTM LFSHTPLVLL GSFIDDFIKL SFFENLGLKA TILIADFIVF SLLVKLYPNN
SEAITTLYWL SPIVLFVNYW NGQTDIIPVA ILLYAITLTK KNHMIASGLT LALAVTAKHS
MLIVIPFFAI YLYKNKRYRR AFFPFLFSFF SALVLLVIPA IFSSGFVEMV LNTPETERIY
HFAIPLGPEI NIYVTPIIYV LLLYSMWRIS WISFDVLMAS IGLGFFALIL LTPSPVGWYL
WLLPFLIGYL LKKNEYSNFL FGTFTFLIIC YHSMFSFGAQ INYFEYDLIF ELDKMSSYMN
IHSRSLWVTL ITTFGGLLSW RLLREEILKN KIYLIGTNPI AIGISGDSGA GKDTFGASLA
GLFGKHSVSY VSGDDYHVWD RYGGMWNALT HLNPSANYIH KFCRDILALL ERKSIYCRTY
EHTTGLFSEP KLRKGNNVLI ASGLHTLFSK SLSDKFDVRV FLEPSDQLRY FWKYQRDVNA
RGSNIESVSA SLKKRQSDAQ RYIHPQKKRA DIIFQLIPLN QDNVSPFNPE QNFDDVRLKL
QVTIKGRVYY ERLSKVLIGL CGISLEKHFT NDNDNVTLTI EGDVFAEDMS LAIQSLNLTF
TELLDIYPVW KDGMLGLMQI ITILHLDETM RVRKK
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