| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1985 |
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| Symbol | |
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| ID | 6116248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2441944 |
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| End bp | 2442732 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633488 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001760364 |
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| Protein GI | 170726338 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0122844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTCATCG ATTCCCACTG TCACCTTGAC CGCTTAAAAG CGGCCCCCGA TCAACAAAGT
CTTAGAGATA TTTTGGCTCA AGCTAAGAGC CGAGGTGTTG ATTATTTTCT CTGTGTTAAT
GTACGCCAAC AAGGTTTTGC TTCAATGCGG GATAAGATGG CCGAGTTTGA TCAGGTCTTT
TTGTCCGCCG GTGTCCATCC ACTTGACGTG CAAGAGGGGC TAAACAGAGT GGAGCTCAAT
GAGTTTGTCA AAGATCCTAA AGTAGTGGCC ATAGGTGAAA CAGGGTTAGA TTACTTTTAT
GCTAATGAGA CTAAAGCCCT GCAGCAAAGC TGCTTCGAAG AGCAGATTGC GTTAGCGGTT
GAGGTGAACA AACCGTTAAT CATTCACACC CGTGATGCCC GTGAAGATAC CATCAACTTT
TTAAAAAATG GCCACGCCGA TAAGGTAGGT GGCGTACTGC ACTGCTTCAC TGAAAGCTGG
GAGATGGCAA AAGCCGCTAT CGATTTAGGT TTCTATATCT CAGTATCAGG CATTGCAACC
TTTAAAAATG CCGGTGAGTT ACGAACTGTT ATGCGCAAAG TGCCCAAGGA TAGGCTGCTT
GTGGAGACAG ATTCTCCCTA TTTAGCCCCT GTGCCTCACA GAGGAAAAGA GAATCAGCCT
GCTTATGTAA GGGATGTCGC TGAGTTTATT GCCGAGCTAA GGGGAGAGAG TTATGAGGAG
TTGGCCGAAT ATACGACCAA TAACTTCTTT AATCTATTTT CCGATGCAGC GAAATTGGTT
GGGCGTTAA
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| Protein sequence | MLIDSHCHLD RLKAAPDQQS LRDILAQAKS RGVDYFLCVN VRQQGFASMR DKMAEFDQVF
LSAGVHPLDV QEGLNRVELN EFVKDPKVVA IGETGLDYFY ANETKALQQS CFEEQIALAV
EVNKPLIIHT RDAREDTINF LKNGHADKVG GVLHCFTESW EMAKAAIDLG FYISVSGIAT
FKNAGELRTV MRKVPKDRLL VETDSPYLAP VPHRGKENQP AYVRDVAEFI AELRGESYEE
LAEYTTNNFF NLFSDAAKLV GR
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