Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1981 |
Symbol | |
ID | 6116244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2438976 |
End bp | 2439983 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633484 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_001760360 |
Protein GI | 170726334 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0643733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0054614 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAT TTATTATCGC CTTTACCGCA GCCATCTTTA CTCTGTTAAC GTTAGCTGGT GGTGTTAGTT TATGGACCTA CAATACTGTT GTAGATTTTA GTCAGTCGAC ACTTAAGCTT GAACAAGCAC AAGATATTGA ATTAAAAAGG GGAACCTCTT TTTATCAATT GGTGAGCTTA TTAGAGCAAA GGGCGTTAAT CAGTGATGGT TGGAAACTGA AGATTTTGGT TAAGCTTCAT CCTGAACTGG CTAAGATCCG AACCGGTCTC TATGAAATCA AACCTGGAGA AACTGTGTCG GGTTTGCTGG AAAAACTCAA TCAAGGTAAA GAGAAGGTAT TTGCAGTTAC TCTAGTTGAG GGGCAAAGTA TTAAAGAGTG GACTGCCATT TTAAATACCT TGCCGCACAC TGAAACCACC GAAGATGTGT TTAATCTTGT GCTCAGTGAG CAAGGTGATG ATTCAGCTCT GCCCGAAGGA AAGTTTTACC CAGATACCTA TCATTATCGC GCTGGGGACA ATATTAAATT ATTAGTCACT CAAAGTTATA ACAAGATGCA GCAGGAGCTA GAAGCTGCTT GGGCTGGCCG CGCTGATAAT CTGCCACTGA AGTCTCCCTA TGAACTGCTT ATCATGGCAT CAATTATTGA AAAAGAGACG GGTAAAGCCA GCGAACGCCC TTGGATCTCG GCGGTATTTA TTAATCGCCT CAATAAAGGG ATGCGCCTGC AAACCGATCC AACTGTTATT TATGGTATGG GGGAGTCATA TAAAGGGGAC ATTACCCGTA AAGCGCTGAG AGAGATGACG CCATTTAATA CATACAGAAT TAATGGGTTA ACACCGACTC CAATTGCAGC GCCAAGTGGT GCAGCCCTGT TAGCTGCGGC GCATCCTGCA GAGGTCAACT ACCTTTATTT TGTCTCAAAA AATGATGGTA GCCATATATT TTCAAGAACA TTAGTCGAGC ACAATCGTGC CGTAAACAAA TATCAGAGAA ACAGATGA
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Protein sequence | MKKFIIAFTA AIFTLLTLAG GVSLWTYNTV VDFSQSTLKL EQAQDIELKR GTSFYQLVSL LEQRALISDG WKLKILVKLH PELAKIRTGL YEIKPGETVS GLLEKLNQGK EKVFAVTLVE GQSIKEWTAI LNTLPHTETT EDVFNLVLSE QGDDSALPEG KFYPDTYHYR AGDNIKLLVT QSYNKMQQEL EAAWAGRADN LPLKSPYELL IMASIIEKET GKASERPWIS AVFINRLNKG MRLQTDPTVI YGMGESYKGD ITRKALREMT PFNTYRINGL TPTPIAAPSG AALLAAAHPA EVNYLYFVSK NDGSHIFSRT LVEHNRAVNK YQRNR
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