Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1944 |
Symbol | |
ID | 6116207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2391585 |
End bp | 2392529 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641633447 |
Product | response regulator receiver modulated CheW protein |
Protein accession | YP_001760323 |
Protein GI | 170726297 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000211383 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0128896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAG TACTAGATTC AGTAGACCAA CGTACCCAAT TAGTCGGTGA AAACCGCTTA GAACTTTTAT TATTTCGAAT TAATGCAACT CAACTATTTG CCATCAATGT TTTTAAAGTC AAAGAGGTAG TTAAACTTCC TCCGTTAAAC TCTGTGCCTG GAAGTCACCC GCATATCTCA GGTGTTGCGA ATATTCGCGG CTCTTCAATT CCGGTGATTG ATCTTAGAGG TGCTATCGGC TTCTCACCCA TGAGTAGTGA TCAAGAGCGT AATCTGATTA TTACTGAATA CAACCGTAGT ATTCAGGGCT TTATGGTGGG TAAGGTTGAA CATATCGTTA ATATGACCTG GAGTGATATT TTACCTCCGC CTAAAACTGC AGGTAAGCAA AATTATCTTA CAGCTATCTG TCGATTAGAG ATCGATGATG TGATCAACAT GGTGTCAATT ATCGATGTTG AAAAGGTGCT AGCGGAGATC ATCAATTACG ATATTCGCCT TTCAGAAGGT GTGTTAGATG AAGAGTTAGC CAAAGAGATG GTTGGTCGTA GAATATTAAT TGCTGATGAT TCATCAACAG CTCGAAGACA GATTAAAGAG ACGCTTGAGC CACTAGGAAT TGAGATTTTA GAGGTGTCTG ATGGCTTGCA AGCCCTCCAG TTACTACAAA GTTGGTGTAA CGAAGGTAAA TCGATCTACG ATGAGATATT AATGCTTATC ACAGATGCTG AGATGCCTGA GATGGATGGA TATAAACTAA CCTCAGAGAT ACGAAGTGAC AATCGTATGT CGGATCTGTT TATTGCATTG AACACCTCAT TAAGTGGCAG TTTTAATGAA GCCATGGTCG AGAAGGTTGG TTGTGATCGA TTTATTTCTA AGTTTCAACC GGATCTCTTA GTTGGTGTCG TACAAGATAA ATTGAGAGAG CAGAAAGAGA AGTAA
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Protein sequence | MTKVLDSVDQ RTQLVGENRL ELLLFRINAT QLFAINVFKV KEVVKLPPLN SVPGSHPHIS GVANIRGSSI PVIDLRGAIG FSPMSSDQER NLIITEYNRS IQGFMVGKVE HIVNMTWSDI LPPPKTAGKQ NYLTAICRLE IDDVINMVSI IDVEKVLAEI INYDIRLSEG VLDEELAKEM VGRRILIADD SSTARRQIKE TLEPLGIEIL EVSDGLQALQ LLQSWCNEGK SIYDEILMLI TDAEMPEMDG YKLTSEIRSD NRMSDLFIAL NTSLSGSFNE AMVEKVGCDR FISKFQPDLL VGVVQDKLRE QKEK
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