Gene Swoo_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1940 
Symbol 
ID6116203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2387437 
End bp2387844 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content41% 
IMG OID641633443 
Producthypothetical protein 
Protein accessionYP_001760319 
Protein GI170726293 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00153231 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0153994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAT TACGTTTAAT ATTTAACATA GCTTGGTTTG TTCTTGGTGG TTTTGTGATG 
GGACTGGCTT GGTGGGTCGC CGGTTTACTC TGTTATATCA GTATTATTGG TATCCCCTTC
GGACGAGCAT GTTTCGTAAT TGGCGAGATG ACTTTCTGGC CATTTGGCCA AGACCATATG
AATCGTCAAA GCCTTACAGG CCGAGAGGAT ATAGGAACCG GCGCATTCGG GACCATAGGT
AATATCATCT GGTTTTTACT TTTCGGGATC TGGTTAGCAA TAGGACATAT TACTCATGCC
TTAGCATGTT TTGTCACCAT CATAGGCATT CCATTTGGTA TTCAACATCT TAAATTGGCT
ATTTTAAGTT TAACGCCTAT AGGACAAACC GTTGTTGCAA AAGCTTAA
 
Protein sequence
MAVLRLIFNI AWFVLGGFVM GLAWWVAGLL CYISIIGIPF GRACFVIGEM TFWPFGQDHM 
NRQSLTGRED IGTGAFGTIG NIIWFLLFGI WLAIGHITHA LACFVTIIGI PFGIQHLKLA
ILSLTPIGQT VVAKA