Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1940 |
Symbol | |
ID | 6116203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2387437 |
End bp | 2387844 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633443 |
Product | hypothetical protein |
Protein accession | YP_001760319 |
Protein GI | 170726293 |
COG category | [S] Function unknown |
COG ID | [COG3304] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00153231 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0153994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAT TACGTTTAAT ATTTAACATA GCTTGGTTTG TTCTTGGTGG TTTTGTGATG GGACTGGCTT GGTGGGTCGC CGGTTTACTC TGTTATATCA GTATTATTGG TATCCCCTTC GGACGAGCAT GTTTCGTAAT TGGCGAGATG ACTTTCTGGC CATTTGGCCA AGACCATATG AATCGTCAAA GCCTTACAGG CCGAGAGGAT ATAGGAACCG GCGCATTCGG GACCATAGGT AATATCATCT GGTTTTTACT TTTCGGGATC TGGTTAGCAA TAGGACATAT TACTCATGCC TTAGCATGTT TTGTCACCAT CATAGGCATT CCATTTGGTA TTCAACATCT TAAATTGGCT ATTTTAAGTT TAACGCCTAT AGGACAAACC GTTGTTGCAA AAGCTTAA
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Protein sequence | MAVLRLIFNI AWFVLGGFVM GLAWWVAGLL CYISIIGIPF GRACFVIGEM TFWPFGQDHM NRQSLTGRED IGTGAFGTIG NIIWFLLFGI WLAIGHITHA LACFVTIIGI PFGIQHLKLA ILSLTPIGQT VVAKA
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