Gene Swoo_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1859 
Symbol 
ID6116122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2297272 
End bp2298297 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content42% 
IMG OID641633362 
Productforkhead-associated protein 
Protein accessionYP_001760238 
Protein GI170726212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000328262 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTATA TCATTGATCC GAATTCAAAC TCTAAAGTTT ACCTTTATGC CCACCACAGT 
TTTGGACGTT TAGCTTATTC AGTAAATACG CTAATAAGTC ATTCAGATAT ATCAAAAATC
CATGCGATAA TAGAGTGGAG TGATGGCATC TGGACTATTC GAGATATCAG CACAAATGGC
TGCTGGTTAA ATAAGATAAA ACTCTTTAGT AATAAGCGCT ATCCACTGAA AGCGGGAGAT
AAGATTAATT TTGCCTCCTT AGAACATCAG GAATATTGTT TAGAAAATAC CGATGCACCT
GCCGACCTTC TTATCCCCTA CGCCGTGCCT GGAGAAGATA ATCAACACCT TAATGATGCC
ATTACACTTG AGGAGTACAA TCTACTTCCT CACTCAAATC CAGAATTAGC CATATTTCAT
GACCCAAAGA TGGATAACTG GAAAGTCTCA TCCATTGACA GTGAAACCGA TGACAACTGC
ATACTCGCAG AGGGGCAAAT TATCGAATTT CAAAAACAGA AATGGCAACT GCACCTTAGC
CATCTAGAGC CATTAACTCA GGCGTTGCAG GACTCTCGAT TAACCCTTGA AGATATCACC
TTTGATTTCT ATCTAAGCTT AGATGAAGAG GTATCACAGC TAAAAGTACA TACTCCAGAA
TCGATATTAG ATCTCCATGT GCGCAGTCAC CACTATTTAA CATTGAATCT AGCCAGATAC
CGCTCCTTAA GCGCGGAGCA AGGATTAGAT GAATCTGAGC AGGGCTGGGT TTATGCAGAG
CAACTCGTCA AAGATTTGGG GATAGAGATC CGCCACCTTA ATATCCAGAT CCACAGAGCC
AGAAAACAGT TCAGCGACAG TGTCAACGTC AATGATGCCG AATACATAAT CCAAAGACAG
GCTGGAAAAG TACGTTTCGG CAGTGCAAAT TTCAATATCT ATAAAGGACA AAAGCTCGAG
TGTGGTCTTC ATCAAAATAG GGAGAGCACT CCAAGCGATA GCCAAACACA GTACGGGCAC
CACTAG
 
Protein sequence
MAYIIDPNSN SKVYLYAHHS FGRLAYSVNT LISHSDISKI HAIIEWSDGI WTIRDISTNG 
CWLNKIKLFS NKRYPLKAGD KINFASLEHQ EYCLENTDAP ADLLIPYAVP GEDNQHLNDA
ITLEEYNLLP HSNPELAIFH DPKMDNWKVS SIDSETDDNC ILAEGQIIEF QKQKWQLHLS
HLEPLTQALQ DSRLTLEDIT FDFYLSLDEE VSQLKVHTPE SILDLHVRSH HYLTLNLARY
RSLSAEQGLD ESEQGWVYAE QLVKDLGIEI RHLNIQIHRA RKQFSDSVNV NDAEYIIQRQ
AGKVRFGSAN FNIYKGQKLE CGLHQNREST PSDSQTQYGH H