| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1838 |
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| Symbol | |
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| ID | 6116101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2273960 |
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| End bp | 2275150 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633341 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001760217 |
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| Protein GI | 170726191 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0199786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0556057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCG AAATTAAGGT ACCCGTACTA CCAGAATCTG TTGCTGATGC AACTATTGCT
ACTTGGCATG TTCAGCCTGG TGAACAAGTA ACACGTGATC AAAACCTTGT TGATATTGAA
ACTGACAAGG TTGTACTTGA AGTGGTTGCC CCTGAAGATG GATCGATTGC TGAATTTCTA
GCAAACGAAG GCGACACTGT TCTTGGTGAA GCTGTCATCG CTAAGTTCAC TGCTGGCGCT
GTTGCTGGTC AAGAAGTGAC GAAAGCGGAA GCTGAGGCCA CCACACCTGA AGCTGCTGAT
GACACCAATG ATGCTCTAAG CCCATCTGTT CGCCGTTTAC TGGGTGAACA TGGTCTTGAA
GCAAGTCAAG TTAAAGGCAC TGGTGCTGGC GGTCGAATTA CAAAAGAAGA TGTTGAAGCG
TTTGTGAAGA GCAAGTCAGC AGCTCCTGCA CCGACGGCTA GTGCACAGGT AGATGTTGCA
CCATTAGCTG AGCGTAGCGA GAAGCGTGTA CCTATGTCAC GTCTTCGTAA GACAATTGCA
AACCGTCTAC TTGAAGCTAA AAACTCTACA GCTATGTTGA CGACATTTAA TGAAGTTAAC
ATGAAGCCAA TCATGGATAT CCGTAAGCAG TATCAAGAGG TTTTTGAGAA GCGTCATGGG
ATCCGTTTAG GTTTTATGTC TTTCTACATT AAAGCGGTAA CGGAAGCGTT GAAGCGTTTC
CCTGAAGTGA ACGCTTCTAT AGATGGTGAT GATATTGTTT ATCACAACTA CTTTGATATC
AGCATTGCGG TGTCAACGCC ACGTGGTCTT GTGACACCTG TTCTTCGTGA TACAGACACC
ATGAGCCTTG CAGATATCGA GCGTAATGTT CGTGAACTTG CAATTAAAGG TCGTGACGGT
AAGTTGACTG TTGATGATAT GACTGGCGGT AACTTCACTG TGACTAATGG CGGTGTATTT
GGTTCACTCA TGTCCACCCC AATTCTTAAT CTGCCACAAA GTGCAATCCT TGGTATGCAT
GCCATCAAGG ATCGCCCAAT GGCAGTGAAT GGGCAGGTTG AAATCCTACC TATGATGTAC
CTAGCATTAT CTTACGATCA CCGTATTATC GATGGTCGTG AGTCAGTTGG TTACTTGGTT
GCCATTAAGG ACTTCCTCGA AGACCCAACT CGTCTGCTGC TTGATCTATA A
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| Protein sequence | MSIEIKVPVL PESVADATIA TWHVQPGEQV TRDQNLVDIE TDKVVLEVVA PEDGSIAEFL
ANEGDTVLGE AVIAKFTAGA VAGQEVTKAE AEATTPEAAD DTNDALSPSV RRLLGEHGLE
ASQVKGTGAG GRITKEDVEA FVKSKSAAPA PTASAQVDVA PLAERSEKRV PMSRLRKTIA
NRLLEAKNST AMLTTFNEVN MKPIMDIRKQ YQEVFEKRHG IRLGFMSFYI KAVTEALKRF
PEVNASIDGD DIVYHNYFDI SIAVSTPRGL VTPVLRDTDT MSLADIERNV RELAIKGRDG
KLTVDDMTGG NFTVTNGGVF GSLMSTPILN LPQSAILGMH AIKDRPMAVN GQVEILPMMY
LALSYDHRII DGRESVGYLV AIKDFLEDPT RLLLDL
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