| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1837 |
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| Symbol | sucA |
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| ID | 6116100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2271108 |
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| End bp | 2273930 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633340 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001760216 |
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| Protein GI | 170726190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.343692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0435988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCATCAC ATCTAAGTGG TGCTAATTCG
ACCTATGTAG AAGAGATGTA TGAAGCCTAT CAAGAAGACC CTCAGTCTGT TGCAGCAGAC
TGGCAAGCGG TGTTTGATAA CCTCCCTTAC GCGAACGGTG CATCAAAAGA TGTTCCGGAA
GCAGCCCACT CTAAAGTACG TGATTATTTT CGTAGTTTAG CGTTAGAAGG TCGTCAGAAG
GGCTCAGCCC GTGTGACAGA TCCTGAAGTC GATGCTAAGC AAGTTAAAGT CCTGCAGATG
ATTAACGCCC ACCGTTTCCG TGGTCACCAG AATGCGAATC TGGACCCATT GGAGCTTTGG
AAGCGTGATC AAGTTTCTGA GCTGGACCCA GCCTTCCACG GTTTAACTAG CGAAGATATG
CAGCGTGAAT TCAATACCGG TTCATTTGCT CATGGTGGTG ACACTATGAA GCTTGGTGAT
CTGATTAAAG CCTTGAAGGC CACCTATTGT GGTTCAATTG GCTCTGAATA CATGCATATT
ACTGATACCG ATGAGAAACG CTGGATACAG CAAAGGTTAG AGCCTTCTTT AGGTAGAGCT
AATTACGATA AACCCGCTAA AACTCGTATC TTGGCAGGCT TAAATGCCGC TGAAGGTATG
GAGAAGTACC TAGGGGCTAA GTTCCCTGGC GCTAAGCGTT TCTCACTGGA AGGTGGTGAT
GCGTTAGTGC CTATGATGCG AGAGATTTTA TATCGCGCAG GTGAAGCTGG CACTAAAGAG
GTTGTGGTGG GCATGGCTCA CCGTGGTCGC TTAAACTTGC TTGTGAATAT CCTAGGTAAA
AAGCCCTCTG AGTTGTTTGA CGAGTTCGCT GGTAAACACA GCGATGCGAT CAATGGCTCT
GGTGATGTTA AGTATCACCA AGGTTTCTCA TCTGATTTTA AAACACCTGG CGGTAACGTC
CACTTAGCCC TCGCGTTTAA CCCATCTCAT CTTGAGATTG TTAACCCTGT GGTTATGGGC
TCAGTTCGTG CTCGTCAAGA CCGCCGTGGT TGTGATAGTG GCTTACAAGT TCTGCCTATT
ACCATTCATG GTGATTCGGC GATTACTGGT CAAGGTATCG TACAAGAGAC ATTTAACATG
TCTCAGACTC GTGGTTTTAA AGTGGGCGGT AGCATTCGAA TTGTTATCAA TAACCAGGTT
GGTTTCACCA CTTCAAACAC AGAAGATGTG CGCTCTACTG AGTATTGTAC TGATATTGCT
AAGATGGTTC AGGCACCGAT ATTCCACGTG AATGCTGATG ATCCTGAAGC AGTTGCTTTT
GTTTCTCAAC TTGCCGTTGA TTACCGAAAT GAGTTTAAAC GTGATGTGGT GATCGAGCTT
GTGTGTTATC GCCGTCATGG CCATAACGAA GCCGATGAGC CTAGTGCAAC TCAGCCATTG
ATGTATGCAA AAATTAAGAA GCATCCAACG CCACGTAAAA TCTACGCTGA TCGTTTGATT
GCTGAAAGCA CCCTTGCAGC CGATGAAGTT ACTTCGATGA TCAATGATTA TCGTGACGCG
CTTGATCACG GTGATTGTGT TGTTGAAGAG TGGCGTCCTA TGACACTGCA CTCTGTTGAT
TGGTCTCCCT ATATCAATAA AGAGTGGGAT GATGCCTATG AAGGGCAGAT GTCTATGGAG
CGTATCAAGA ACTTAGCTGA GAAGATCAGC TACGTACCTG AAAACCATAA ACTGCAATCT
CGTGTGGCTA AGATCTACAA AGATCGTGTC TTAATGGCAA GTGGTGAAAA ATTGCTCGAC
TGGGGTTTTG CTGAAACCTT AGCCTATGCA TCTATTGTCG AAGATAAGCA GCGTATCCGC
ATTACCGGTC AAGATTCTGG TCGTGGTACC TTCTTCCATC GTCATGCTGT TTTGCATAAT
CAAAACGATG CAACGGCGTA TATGCCACTG CGTAACATTG CCGATGAACA AGGCCCTATT
GATATTACTG ATTCAGTATT ATCTGAAGCG TCGGTGTTAG CATTTGAATA TGGCTATGCA
ACAGCAGAGC CAGGTGGATT GACTCTATGG GAAGCACAAT TTGGTGATTT TGCCAACTGT
GCCCAAGTGG TTATCGATCA GTTCCTCTCC TCTGGTGAGC AGAAGTGGGG TCGCTTATGT
GGTCTGACAA TGCTACTGCC TCACGGCTAT GAAGGACAGG GACCAGAGCA TTCAAGTGCC
AGATTAGAGC GCTTCCTACA GCTTTGTGCT AACCACAATA TGCAGGTATG TGTGCCATCA
ACTCCAGCTC AGGTTTACCA CATGCTACGT CGTCAGGTTG TTAGACCTAT GCGACGTCCA
TTGGTTGTGA TGTCTCCTAA ATCACTCTTG CGTCATCCAT TAGCGGTATC GTCAATGGAG
GAGCTTGCAG AAGGGACATT CCAAAATGTG ATCCCTGAAG TTGAAAGCTT AGACAACAGT
AAGGTTGACA GAGTTGTGTT CTGTAGCGGT AAGGTGTATT TCGAGTTGCT TGAAAAGCGA
CGTAAAGAGA ATGTCACTAA CGTTGCTCTG GTTCGTTTGG AGCAGCTTTA CCCATTCCCG
CATGAAGACA TGGACTCTCT TTTAGCTGAA TATCAGCATG TTAAAGATTT TGTTTGGTGT
CAGGAAGAGC CTCAAAACCA AGGTGCTTGG TACTGTAGTC AACACCATTT CTGGACATCG
ATTCCAGCGG GTGCAAAGTT AACCTATGCC GGTCGTGAAG CATCAGCTGC ACCCGCTTGT
GGTTATCCAT CACTGCATGC CAAAGAGCAA GAATCTTTGA TTAATAGCGC ATTAAAACTG
TAG
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| Protein sequence | MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QEDPQSVAAD WQAVFDNLPY ANGASKDVPE
AAHSKVRDYF RSLALEGRQK GSARVTDPEV DAKQVKVLQM INAHRFRGHQ NANLDPLELW
KRDQVSELDP AFHGLTSEDM QREFNTGSFA HGGDTMKLGD LIKALKATYC GSIGSEYMHI
TDTDEKRWIQ QRLEPSLGRA NYDKPAKTRI LAGLNAAEGM EKYLGAKFPG AKRFSLEGGD
ALVPMMREIL YRAGEAGTKE VVVGMAHRGR LNLLVNILGK KPSELFDEFA GKHSDAINGS
GDVKYHQGFS SDFKTPGGNV HLALAFNPSH LEIVNPVVMG SVRARQDRRG CDSGLQVLPI
TIHGDSAITG QGIVQETFNM SQTRGFKVGG SIRIVINNQV GFTTSNTEDV RSTEYCTDIA
KMVQAPIFHV NADDPEAVAF VSQLAVDYRN EFKRDVVIEL VCYRRHGHNE ADEPSATQPL
MYAKIKKHPT PRKIYADRLI AESTLAADEV TSMINDYRDA LDHGDCVVEE WRPMTLHSVD
WSPYINKEWD DAYEGQMSME RIKNLAEKIS YVPENHKLQS RVAKIYKDRV LMASGEKLLD
WGFAETLAYA SIVEDKQRIR ITGQDSGRGT FFHRHAVLHN QNDATAYMPL RNIADEQGPI
DITDSVLSEA SVLAFEYGYA TAEPGGLTLW EAQFGDFANC AQVVIDQFLS SGEQKWGRLC
GLTMLLPHGY EGQGPEHSSA RLERFLQLCA NHNMQVCVPS TPAQVYHMLR RQVVRPMRRP
LVVMSPKSLL RHPLAVSSME ELAEGTFQNV IPEVESLDNS KVDRVVFCSG KVYFELLEKR
RKENVTNVAL VRLEQLYPFP HEDMDSLLAE YQHVKDFVWC QEEPQNQGAW YCSQHHFWTS
IPAGAKLTYA GREASAAPAC GYPSLHAKEQ ESLINSALKL
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