Gene Swoo_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1834 
Symbol 
ID6116097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2268054 
End bp2268401 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content45% 
IMG OID641633337 
Productsuccinate dehydrogenase, hydrophobic membrane anchor protein 
Protein accessionYP_001760213 
Protein GI170726187 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00784202 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0736176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACTA ATGCAGCGAG TCTTGGCCGA AGCGGTGTCC ATGACTTTAT TCTTATACGC 
TCAAGTGCAG TCGTTCTGGC TATCTATACC ATCTTTTTGG TTGGATTTAT TGCATGTAGC
TCCCCACTAA CTTACGACGC ATGGCATGGC TTATTTAGCG CATTGCCGAT GAAGGTCTTT
ACACTACTTG CACTTGTTGC AGTTCTGATC CATGCATGGA TCGGTATCTG GCAGGTACTA
ACAGATTACG TTAAGCCATT GATGCTGCGT GGTGTACTTC AGTTTGTGTT TGTCGTTGCG
GCCTTTAGTT ATTTGGCTGC GGGCATTTTG ATAGTGTGGG GTGTTTAA
 
Protein sequence
MVTNAASLGR SGVHDFILIR SSAVVLAIYT IFLVGFIACS SPLTYDAWHG LFSALPMKVF 
TLLALVAVLI HAWIGIWQVL TDYVKPLMLR GVLQFVFVVA AFSYLAAGIL IVWGV