Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1826 |
Symbol | |
ID | 6116089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2255728 |
End bp | 2256621 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633329 |
Product | hypothetical protein |
Protein accession | YP_001760205 |
Protein GI | 170726179 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00978656 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATAG TATTACGAGA TAATGATCAA GGGCCATTTT TAAGTAAAGT GTTAGCTTAT GGCCAAGCTG AGTCCTTACT CGATGAAGCG CAGCTTGCTC AAATTAAGGC TAAAGCTGTG TTGATGAGCC TTAAGCTTGC CGATAAATTT TATAATAAGT ATAAGATGCA CTTGCTAGAG CATGCTGCCT TTGATGTTAT CGGGGTGGTG AGTTTAGGCT TGATGGAGCA GAGCGAGCGA GATCTTAACC GTGGACTTAG CCTTTTGATG ACAGCCGATG GTATCGTAAA GTCATTTCAA AAAGGTTGGA GCATGCTCAC AACCGTGAGT AAGTATAAGC TTAGCGGTAA ATCAATCTAT GGCGATATAG ATAAAGTCTT ACTTGAAAAG GTCTCTTGCC CGAGTGACGC TCAGGAGTGG AGTGGATGGC AAGCTTATCA AGAGGCATTA TCGGATTTTA ATCGTCAAGA ATCTGTGGTG AGTTTACTCA GGCAGTTTTA TTCCCAAGCA AGTTACGACC CTTTAGATTG TTTAAGCCTT GAAAGTGTAT TTGCTGAAGT GGTCTTGTAT CGCTTGTTTT TTGGACCCGT TAAGATTAAG CAAGACCTTA AGCAACGTTT GGCCCATATT GAACTCGAAG AACATTGGTT TACCCTTGAC CATATTGAAC TTGAGATGAA CAACACGCTT GGTGAGTTAC CACCGGCGCT TGCTGAAACC ATTAGTGTAG ATTTAGGTAA GTATTTTGCT CCTGGGTTAC TGCGTACCTT AACTTTTGCT AAGGGCTACC GTGAACAGCT GTTAAAAGGG GTAAGTCCTG AGCGTTTGGA GCGACTAGAG TACAAAGAGG GGCTAACAGG TTTGTTAGGT TGGCCTATCT ATATTGTGAT GTAG
|
Protein sequence | MQIVLRDNDQ GPFLSKVLAY GQAESLLDEA QLAQIKAKAV LMSLKLADKF YNKYKMHLLE HAAFDVIGVV SLGLMEQSER DLNRGLSLLM TADGIVKSFQ KGWSMLTTVS KYKLSGKSIY GDIDKVLLEK VSCPSDAQEW SGWQAYQEAL SDFNRQESVV SLLRQFYSQA SYDPLDCLSL ESVFAEVVLY RLFFGPVKIK QDLKQRLAHI ELEEHWFTLD HIELEMNNTL GELPPALAET ISVDLGKYFA PGLLRTLTFA KGYREQLLKG VSPERLERLE YKEGLTGLLG WPIYIVM
|
| |