| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1820 |
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| Symbol | lpxK |
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| ID | 6116083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2251479 |
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| End bp | 2252504 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633323 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_001760199 |
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| Protein GI | 170726173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.118843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGATT TTGTTAATAG ACTCTGGTAT CCGAAAGCCG ATGATTGTAT CGGCTACAGA
GGGATAAAGT GGTTACTTAC TCCACTTAGT TTGTTGTTTT GGTGTGTCAG TAGCCTTCGT
AGGCTGCTGT TTAAGCTTGG TATCAAGGCC GCAGTGTCTC TTCCTGTTCC TGTGATTGTT
GTGGGCAATA TTACGGTGGG GGGCAGCGGT AAAACGCCTA CCGTTATCTA CCTTATTGAA
CTCCTGCGTG CCCAGGGATT AAATCCAGGT GTAGTCAGTC GAGGTTATGG GGTTAAGATT
GACGGCGTTA AAATCGTTGA GCCTCACTTA GGCGCTGATA GTGTGGGTGA TGAGCCTGCT
ATGATAGTGG CCAGAACTCA GGTTCCTATG GTGATAGGCA GCGATCGCGT TAGTGCTGCT
AAGTGTTTAA TTGAGCGTTT TGATGTTGAT ATCATTATTA GTGATGATGG CCTTCAGCAT
TATAAAATGG CGCGGGATGT TGAGTTACTT ATTCTTGATG GTGAGAGACG TTTTGGAAAT
GAGTTGCTGT TGCCGGCAGG TCCTCTTAGG GAGTTGACAG GCAGACAAAA AACAGTGGAT
TTCACCATAG TGAACGGTGA AGCGAAAGAG GGCGAGTTCC AGATGATACT TGAGCCAACC
CGCTTTATAC CTGTATCTCC CCGTTCTGAG TTGGTTTTTG AGCCCGTTGA GCATGTTGTC
GCTATTGCGG GGATCGGGAA TCCTGAGCGG TTTTTTACCA CTTTAGCTCA ATCAGGTGTT
GAGGTGATAA AAACCAAGGC GTTTGAAGAT CATCAAAAAT TCAGCTTAAC GCAGATAACT
CAAGTTACCG GAAACTCTCC TGTGTTGATG ACTGAAAAAG ATGCGGTTAA ATGTCGCGAT
TTTGCAAAAG AAAACTGGTG GTATTTGGCT GTAGATGCCA AGCTAGCAGA AAATTTTGAT
CAGCGACTGA TGGATAAAGT TCGTCAGGTT ATCGCTGTTA AACAAGGAAA TAGAGATGTC
GTTTGA
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| Protein sequence | MQDFVNRLWY PKADDCIGYR GIKWLLTPLS LLFWCVSSLR RLLFKLGIKA AVSLPVPVIV
VGNITVGGSG KTPTVIYLIE LLRAQGLNPG VVSRGYGVKI DGVKIVEPHL GADSVGDEPA
MIVARTQVPM VIGSDRVSAA KCLIERFDVD IIISDDGLQH YKMARDVELL ILDGERRFGN
ELLLPAGPLR ELTGRQKTVD FTIVNGEAKE GEFQMILEPT RFIPVSPRSE LVFEPVEHVV
AIAGIGNPER FFTTLAQSGV EVIKTKAFED HQKFSLTQIT QVTGNSPVLM TEKDAVKCRD
FAKENWWYLA VDAKLAENFD QRLMDKVRQV IAVKQGNRDV V
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