| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1806 |
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| Symbol | |
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| ID | 6116069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2233611 |
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| End bp | 2234987 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633309 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001760185 |
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| Protein GI | 170726159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0700873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0255188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGTG TATTTGACAT GTTCAAAATA GGAATTGGTC CCTCTAGTTC ACATACTGTA
GGCCCGATGA AAGCTGGAAA CATCTTCATA GAGGATCTCC AGAAAGCAGG CCTATTGGAT
ACAACTGATG AGTTGCGTTC AGAGCTGTTT GGATCGCTCG GTCAAACGGG TAAAGGTCAC
GGTACAGGTA AAGCCGTGAT ACTAGGCTTA ATGGGAGAAG CACCAGATAC CGTAGATACT
GACGCAATTG ATGGGATCTT AAATGAGGTC AGTCAAAGTG AAGTCCTATT GATGGCCAAC
GGCACAAAAG TCACCTTTAC TCGTGAATTA GGGATAACCT ACCATAGACG AAAAAGCCTC
CCAGCCCACG CCAATGCGAT GACGCTTTAT GCATACCGCC AAGGTCAATG CATATTCGAG
CGAACTTATT ACTCCGTTGG TGGTGGCTTT ATCTTAGATC AAGATGAGAT TTTAGCCCAA
GATGCATCCC CCGCCGCACC GATAAAATCT GCCCCCTATG ATTTTAACAG TGCAACTCAG
CTCCTCACTC TCTGCACAGA TAATGGGTTA AGTATCTCAT CGCTGATGAT GGAGAACGAA
CTGAGCATAG CCTCTGAGGC TGAGATAAAG CAGCAGTTAT GGATTATCTG GCAAACCATG
AAAAACTGTG TCGAGCGCGG ATATAAGAAA GAGGGGATCC TCCCAGGAGG CTTAAAACTA
AGACGCCGTG CCCCTGCTAT GTACCGCCGT TTAAAAGCTG AAGGTAAAAA CAGCGTCGAT
CCGCTAACGG CATTGGATTG GGTAGATCTG TTCGCGCTAT CGGTGAATGA GCAAAATGCA
GCAGGTGATC GCGTAGTCAC CGCACCAACC AACGGGGCCG CAGGCATCAT TCCTGCCGTA
CTTTGCTACT ATGATATGTT TGTTCAGGAA GTGGATCTTG AAGTCTGTTG TCGTTACCTG
TTAACCGCTG CCGCTATCGG TATCCTTTAT AAGAAGAATG CATCTATATC CGGTGCAGAA
GTCGGTTGCC AAGGTGAAGT TGGCGTAGCT TGCTCTATGG CTGCAGGAGC CCTAACAGAG
ATCATGGGCG GTACCATTGA GCATGTTGAA AATGCAGCTG AGATTGGCAT GGAGCATAAC
TTAGGCTTAA CCTGCGACCC TGTTGGCGGT CTAGTACAGG TTCCCTGCAT AGAGCGTAAT
GCTATGGGCG CCGTCAAGGC CATTAACGCT TCCAGAATGG CACTGCACGG AGATGGAAAC
CACAAAGTAT CCCTAGATAA AGTGATCAAA ACCATGATGG ATACAGGCAA GGATATGCGC
AGCAAGTATA AAGAAACCGC TAAAGGTGGT TTGGCCGTTA ATATCGTAGA GTGTTAA
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| Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGNIFI EDLQKAGLLD TTDELRSELF GSLGQTGKGH
GTGKAVILGL MGEAPDTVDT DAIDGILNEV SQSEVLLMAN GTKVTFTREL GITYHRRKSL
PAHANAMTLY AYRQGQCIFE RTYYSVGGGF ILDQDEILAQ DASPAAPIKS APYDFNSATQ
LLTLCTDNGL SISSLMMENE LSIASEAEIK QQLWIIWQTM KNCVERGYKK EGILPGGLKL
RRRAPAMYRR LKAEGKNSVD PLTALDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV
LCYYDMFVQE VDLEVCCRYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE
IMGGTIEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAVKAINA SRMALHGDGN
HKVSLDKVIK TMMDTGKDMR SKYKETAKGG LAVNIVEC
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