Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1797 |
Symbol | |
ID | 6116060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2219355 |
End bp | 2220200 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633300 |
Product | thioredoxin domain-containing protein |
Protein accession | YP_001760176 |
Protein GI | 170726150 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00348973 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000176932 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGCTG TTTTAGAACT GACTAAAGAT AATATTCAAG ATGTGGTTGA TGCATCGATG AAGCAAGTTG TCGTCTTAGC CTTTTGGTCG CAGCAAAGTC CAGAAAGTGT GGCACTATCT CAAACCCTAA CCGGGATGGC ACATAAGCAA GCTGGTCGTT TTGTGCTAGC AAAAGTCGAT TGCGATAAAG AGATGGAGAT AGCTAACTAC TTCCAAATTC AAAACGTGCC GACCACACTT GTTTTGAGTG AAGGTAAGCC TGTGGATGGC TTTGCGGGGC TTCAAGAGGA GGTGCAGATT GCAGCAATGC TTGATAAACA TCTTCCTGCC CAGTGGCAGA TACAGCTTAA TGAGGCGAAA AACTTACTGG CCTTGCAAGA TGCGGCGCCA GCACTGGCTT TGTTGAAGCA AGCTTACGCT GAGTCGCCTA ATGCCGAAGT TACTTTGGTT TTTGCCGATG CTTGTTTAAT GTTAGATGAT TTTGATTCAG CGGCTGAGCT ATTAGCCAGT ATAGGCCTTG CAGATCAAGA CAGTTATTAT CAGAGTTTGA AGGCCAAACT TGCCTTAGCA TTAGATGCTG CGGACAGCCC TGAGATAAGG GAGCTACAAA AAGCAGTGGA AAGTGAGCCG GAGAATATCG CTCAGTTACT GTTACTGGCT AAGGCTCTGC ACCAAGCAAA ACGTAACGAG GAAGCATTAG CGATATTATT TACGCCTTTA TCTAAGGATA TTAGTGTAGA AAATGGTGAG GTTAAGCAGT TGTTTTTAGA GATCCTCACT GCGTTAGGTC AGGGAAATAC ACTGGCAAAT CAATATCGGC GAAAACTCTA CAGTCTCTTA TACTAA
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Protein sequence | MEAVLELTKD NIQDVVDASM KQVVVLAFWS QQSPESVALS QTLTGMAHKQ AGRFVLAKVD CDKEMEIANY FQIQNVPTTL VLSEGKPVDG FAGLQEEVQI AAMLDKHLPA QWQIQLNEAK NLLALQDAAP ALALLKQAYA ESPNAEVTLV FADACLMLDD FDSAAELLAS IGLADQDSYY QSLKAKLALA LDAADSPEIR ELQKAVESEP ENIAQLLLLA KALHQAKRNE EALAILFTPL SKDISVENGE VKQLFLEILT ALGQGNTLAN QYRRKLYSLL Y
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