Gene Swoo_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1778 
Symbol 
ID6116041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2200248 
End bp2200571 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID641633281 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_001760157 
Protein GI170726131 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000335505 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATTT CAATGACTCC TGCGGCTGCC GAACGCGTTA AAAGCTTTCT GGACAGTCGC 
GGCAAGGGAA TTGGTTTACG ATTAGGGCTC AAAACATCAG GGTGTTCAGG GATGGCTTAC
ATCATTGAAT TTGTTGATGA TTTGAACGCT GATGATGAAG TATATGAGAT CGATGGTGTG
AAAATTATTA TCGATGCAAA AAGCTTTATC TACCTTCAGG GGATCGAGTT AGACTTCGTC
AAAGAAGGAC TCAATGAAGG TTTCCAGTTT AACAATCCCA ACGCTAAAGG GGAGTGCGGC
TGTGGTGAAA GTTTCACAGT CTAA
 
Protein sequence
MAISMTPAAA ERVKSFLDSR GKGIGLRLGL KTSGCSGMAY IIEFVDDLNA DDEVYEIDGV 
KIIIDAKSFI YLQGIELDFV KEGLNEGFQF NNPNAKGECG CGESFTV