Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1748 |
Symbol | |
ID | 6116011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2172682 |
End bp | 2173911 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633252 |
Product | serine/threonine transporter SstT |
Protein accession | YP_001760128 |
Protein GI | 170726102 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3633] Na+/serine symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.522242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0298803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAA ACCAATCTTT TTTAGCCAAA ATGGCTAATG GCAGCTTAGT GCTGCAGATC CTAGTTGGGA TTATCGCGGG CATTATTGTT GCCACACTTT CTGAAAGCGC AGCTCAAAGT GTCGCATTTT TAGGTCAGTT GTTTGTTGGT GCATTAAAGG CTATAGCACC AATATTAGTG TTTATTTTAG TTGCAGCTTC CATTGCAAAT CAGAAGAAAA ACGCTAAGAC CAATATGCGT CCTATTGTGA TTTTATATCT TTTTGGTACC TTCGCCGCCG CAGTTACCGC TGTCTTGATG AGTTTTGCAT TTCCGACCAC ACTCGCATTA ACCTTAGATG CGGCTCAGGC AAGCCCGCCA GAGGGGATCG GTGAAGTCAT TCATACCCTA CTTTTTAAAT TAGTTGATAA CCCTGTTAAT GCGTTAATGA CGGGTAACTA TATCGGTATT TTAGCCTGGG GTGTGGGTCT TGGTTTGGCA TTGCATCATG CAACGGATTC AACTAAGCAA GTGTTTGCTG ATGTGAGCCA TGGTGTATCT CAAATGGTGC GCTTCATTAT TCGCTTAGCT CCGATTGGTA TTTTTGGTTT AGTATCATCA ACATTTGCAA GTACAGGTTT TAGCGCTATT GCCGGCTATA TGCACCTGCT TCTTGTTCTT CTTGGGGCAA TGGCGATTAT GGCGTTGATC ATCAACCCTG CGATTGTGTA CTTTAAAATA CGCCGTAACC CATACCCATT GGTGTTTACT TGTATTCGTG AAAGTGGTGT GACAGCCTTC TTTACTCGCT CTAGCGCCGC CAATATCCCA GTGAATATGG CTTTGTGTGA AAAGCTTAAG CTACACGAAG ATACGTATTC TGTATCTATC CCGTTAGGTG CGACGATTAA TATGGGCGGT GCAGCAATTA CGATTACCAT CCTGACATTA GCTGCGGCCA ATACCATGGG TGTTCAAGTT GATATTCTGA CTGCGATCTT GCTCAGTGTG GTTGCAGGTA TTTCTGCTTG TGGCGCGTCG GGTGTGGCAG GTGGTTCGCT CTTGCTTATT CCATTGGCCT GTAGTTTATT TGGGATCTCC AATGATATTG CAATGCAAGT GGTTGCGGTT GGCTTTATTA TCGGTGTGAT CCAAGACTCG GCAGAAACGG GCCTTAACAG TTCAACTGAC GTTATCTTTA CTGCTGCAGC ATGTGAAGCT GCTGAAAGAA AAGAGAATGC TGGCGCATAA
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Protein sequence | MNQNQSFLAK MANGSLVLQI LVGIIAGIIV ATLSESAAQS VAFLGQLFVG ALKAIAPILV FILVAASIAN QKKNAKTNMR PIVILYLFGT FAAAVTAVLM SFAFPTTLAL TLDAAQASPP EGIGEVIHTL LFKLVDNPVN ALMTGNYIGI LAWGVGLGLA LHHATDSTKQ VFADVSHGVS QMVRFIIRLA PIGIFGLVSS TFASTGFSAI AGYMHLLLVL LGAMAIMALI INPAIVYFKI RRNPYPLVFT CIRESGVTAF FTRSSAANIP VNMALCEKLK LHEDTYSVSI PLGATINMGG AAITITILTL AAANTMGVQV DILTAILLSV VAGISACGAS GVAGGSLLLI PLACSLFGIS NDIAMQVVAV GFIIGVIQDS AETGLNSSTD VIFTAAACEA AERKENAGA
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