Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1736 |
Symbol | |
ID | 6115999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2159159 |
End bp | 2159887 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641633240 |
Product | LamB/YcsF family protein |
Protein accession | YP_001760116 |
Protein GI | 170726090 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.220202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA ATTGTGACTT AGGTGAAAGC TTTGGTTCTT GGTGTAAAGG TCAAGATGAG CTAGTTATGC CTCTGATTGA CCAGGCTAAT ATAGCATGTG GTTTTCATGC AGGCGATCCT CAAATAATGG AAAATACGGT TAAACTGGCT ATTGAAAATA ATGTTGAGAT TGGTGCACAC CCAGGTTACC CCGATCTTAT TGGATTTGGG CGTAGACCAT ATTCTTGTGA TTTATTAGAG CTAAGAAGTA TTCTGCTTTA TCAAATTGGG GCACTGCATG CAATGTGCAG CAGTTCAGGT ACCAAGGTAT CTTATGTAAA GCCACATGGA GCTTTATACC ATTCAATGAT GAAAAATGAG GATGTCATGA AATGTATTTT ACAAACTCTT TCCAGTTTAC CTTTTGAACT GTCATTAATG GTACAAGCAT CGACTGAATA CTGTAAACAT ATCGATATGG CATCTAGCTT AGGCGTTAAA TTGATTTTTG AAGCATTTGC AGATCGTTCT TATGTGGATC ACAACAATTT AGCAGGAAGA GATATCCCAA ATGCTGTTAA GCATGACAGT GATGAAATAT TTTTAAATAT TAAGAATATG AAAGAAAACC GTCAAGTGGT CAGTATTTCT GGCGAAATTA TTGATATGAA AATGGATACA ATCTGCTTAC ATGGTGATAA TGAAAGCTCC TTTTTAGCGC TAGATAAATT TCACCGTGCA GGGCTATGA
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Protein sequence | MKINCDLGES FGSWCKGQDE LVMPLIDQAN IACGFHAGDP QIMENTVKLA IENNVEIGAH PGYPDLIGFG RRPYSCDLLE LRSILLYQIG ALHAMCSSSG TKVSYVKPHG ALYHSMMKNE DVMKCILQTL SSLPFELSLM VQASTEYCKH IDMASSLGVK LIFEAFADRS YVDHNNLAGR DIPNAVKHDS DEIFLNIKNM KENRQVVSIS GEIIDMKMDT ICLHGDNESS FLALDKFHRA GL
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