| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1722 |
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| Symbol | |
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| ID | 6115963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2138625 |
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| End bp | 2139992 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633204 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001760102 |
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| Protein GI | 170726076 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0267167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCTG AAAGCCTGGA GCAATATAGA GTCATCATTG TCGATGATGA ACCGCTTATC
GGTTCGGCAC TGGTACAACT GTTTGAACTT GAAGGGATCT CAGCCTTCGC CACCTCTGAG
CCCAAATCAA TCATTGAACG AATTGATATC AATTGGCCTG GAGTATTAAT CTCAGATGTA
AATATGCCTG AGCTAAATGG CATCTCTTTG ATGCAGAGCC TTATCAAGCA AGATAACGAT
CTGCCCATCA TACTCCTCAC CGGATTTGGT GATATAGCCA TGGCAGTCAA CGCGCTTAAA
CAGGGCGCCT ATGATTTCCT AGAGAAGCCC TTTAACAACG AATATATGCT CGATGTGGTT
AAACGAGCCT TAGAAAAACG AGCATTAACC CTTGAAAACC GGAAGTTAAA ACAAGAGCTT
GAGTCAATTA GCTTTCCCGG TCCCAGAATA TTGGGACACA GTCCGGGGAT CAAGCAGATG
AAACATATTC TCCATCAGGT GTTGGATATG CCTGCCGATG TACTCATAGA GGGAGAAACC
GGTACAGGAA AAGAGCTGGT CGCCCGTTAC CTTCATGATC ATAGTGTACG CAACCAAGCC
AACTTTGTTG CTATAAACTG TGGGGCTATC CCCGAAACGA TTATTGAGAG TGAGCTCTTC
GGCGCCGAAG CTGGGGCCTT CACAGGTGCT GATAAAACAC GAATTGGAAA ATTTGAATAT
GCAAACGGTG GCACTCTGTT TCTCGACGAA ATAGAGAGCA CTCCCCTCTC GCTTCAAGTA
AAGTTACTTA GAGTATTAGA GGACAGATGT GTCGAACGAC TCGGATCAAA CAAAACGGTT
CCACTCGATA TTCGAATCAT AGCCGCCACC AAAGTCGACC TAGATAGCCT GTGTAAAACA
GGTGAGTTCA GACAAGATCT GCTCTACCGA TTGAACTTAG TCACTGTGTC TATTCCTGCC
CTTAGAGAGC GACGAGAAGA TATTGGCCTA CTGTTTTTAC ATTTCGCTCG AATAGCCTCC
TCTCGGTATC ACAAGGCGCT TATCCCATTA ACCTCTGAAC AAGGTGCCCA ACTCACCTCA
CATGATTGGC CAGGCAATGT CAGAGAGCTA AGAAACCTTG CTGAACGCTA TGTTTTGCTC
GGTGCAGAAG CAGCCTTTGC GACCTCAATA AATAACCCTG TCAATCTTAA TGGCGCCATG
TCGTTACAAC AGAGAGTCGA GTTTTTCGAA CGTCTCTTAA TAGAGGAAGC CCTTAGCCAC
AACAAAGGCA GTATCAAGCT CACCATGGAG CAGCTAGAGC TGCCCCGTAA AACCCTCTAT
GACAAGATGC AAAAATATGA TTTAGACAGG AAACTGTTTA TTCAGTAA
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| Protein sequence | MSPESLEQYR VIIVDDEPLI GSALVQLFEL EGISAFATSE PKSIIERIDI NWPGVLISDV
NMPELNGISL MQSLIKQDND LPIILLTGFG DIAMAVNALK QGAYDFLEKP FNNEYMLDVV
KRALEKRALT LENRKLKQEL ESISFPGPRI LGHSPGIKQM KHILHQVLDM PADVLIEGET
GTGKELVARY LHDHSVRNQA NFVAINCGAI PETIIESELF GAEAGAFTGA DKTRIGKFEY
ANGGTLFLDE IESTPLSLQV KLLRVLEDRC VERLGSNKTV PLDIRIIAAT KVDLDSLCKT
GEFRQDLLYR LNLVTVSIPA LRERREDIGL LFLHFARIAS SRYHKALIPL TSEQGAQLTS
HDWPGNVREL RNLAERYVLL GAEAAFATSI NNPVNLNGAM SLQQRVEFFE RLLIEEALSH
NKGSIKLTME QLELPRKTLY DKMQKYDLDR KLFIQ
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