Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1706 |
Symbol | |
ID | 6115947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2122529 |
End bp | 2123278 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633188 |
Product | putative hydrolase |
Protein accession | YP_001760086 |
Protein GI | 170726060 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.946189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTATC TCGTCGATGT TCATGCCCAT ACCATAGCGT CAACTCACGC CTATAGCACA ATTCATGATT ATATCTCTGT GGCAAAAGAG AAAGGTCTTA AGCTCTTTGC GGTAACCGAT CACGGTCCAG ACATGGCGGA TGCCCCTCAT TTTTGGCATT TTGTTAATAT GAGAGTCTTG CCCAGATTGG TAGATGGTAT TGGCATTTTA AGAGGTATAG AAGCCAACAT AAAAAATCGA GATGGAGAGA TTGATTTTTT CGGTGACTAT CTTAAAGAGT TGGATATCGT ACTTGCTGGA TTTCACGAAC CGGTATTTCC TCCCTCTGAT CGTCAAACAC ATACTCAGGC GATGATCTCG ACGATTGAGA GTGGCAATGT GGATATTATT ACTCACCCGG GTAATCCAGC TTATCCTATC GATATTGATA AAGTTGCAGA AGCGGCAGCA AAACATAATG TGGCTCTGGA GATCAATAAC TCCTCTTTTC TTGCATCGCG CAAAGGCAGT GAAGGTAACT GTATCGCGAT TGCACGTGCA GTTCACGACG CTGGAGGCTT GCTGGTGATG GGATCTGATT CCCATATCTC TTTCTCTTTA GGGGGATTTG AGCAGGCCAT TTTAGTTATC CGTGAAGCAG AGTTTCCTGA GGAGAGACTA CTCAATCGAA GCCCACAGGC TTTGCTCTCT TTTTTGTCTG AAAGAGGGCA TGACTCCCTT GATGAGTACT CTGTACTACT AAGGAGCTAA
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Protein sequence | MQYLVDVHAH TIASTHAYST IHDYISVAKE KGLKLFAVTD HGPDMADAPH FWHFVNMRVL PRLVDGIGIL RGIEANIKNR DGEIDFFGDY LKELDIVLAG FHEPVFPPSD RQTHTQAMIS TIESGNVDII THPGNPAYPI DIDKVAEAAA KHNVALEINN SSFLASRKGS EGNCIAIARA VHDAGGLLVM GSDSHISFSL GGFEQAILVI REAEFPEERL LNRSPQALLS FLSERGHDSL DEYSVLLRS
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