Gene Swoo_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1706 
Symbol 
ID6115947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2122529 
End bp2123278 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content44% 
IMG OID641633188 
Productputative hydrolase 
Protein accessionYP_001760086 
Protein GI170726060 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.946189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTATC TCGTCGATGT TCATGCCCAT ACCATAGCGT CAACTCACGC CTATAGCACA 
ATTCATGATT ATATCTCTGT GGCAAAAGAG AAAGGTCTTA AGCTCTTTGC GGTAACCGAT
CACGGTCCAG ACATGGCGGA TGCCCCTCAT TTTTGGCATT TTGTTAATAT GAGAGTCTTG
CCCAGATTGG TAGATGGTAT TGGCATTTTA AGAGGTATAG AAGCCAACAT AAAAAATCGA
GATGGAGAGA TTGATTTTTT CGGTGACTAT CTTAAAGAGT TGGATATCGT ACTTGCTGGA
TTTCACGAAC CGGTATTTCC TCCCTCTGAT CGTCAAACAC ATACTCAGGC GATGATCTCG
ACGATTGAGA GTGGCAATGT GGATATTATT ACTCACCCGG GTAATCCAGC TTATCCTATC
GATATTGATA AAGTTGCAGA AGCGGCAGCA AAACATAATG TGGCTCTGGA GATCAATAAC
TCCTCTTTTC TTGCATCGCG CAAAGGCAGT GAAGGTAACT GTATCGCGAT TGCACGTGCA
GTTCACGACG CTGGAGGCTT GCTGGTGATG GGATCTGATT CCCATATCTC TTTCTCTTTA
GGGGGATTTG AGCAGGCCAT TTTAGTTATC CGTGAAGCAG AGTTTCCTGA GGAGAGACTA
CTCAATCGAA GCCCACAGGC TTTGCTCTCT TTTTTGTCTG AAAGAGGGCA TGACTCCCTT
GATGAGTACT CTGTACTACT AAGGAGCTAA
 
Protein sequence
MQYLVDVHAH TIASTHAYST IHDYISVAKE KGLKLFAVTD HGPDMADAPH FWHFVNMRVL 
PRLVDGIGIL RGIEANIKNR DGEIDFFGDY LKELDIVLAG FHEPVFPPSD RQTHTQAMIS
TIESGNVDII THPGNPAYPI DIDKVAEAAA KHNVALEINN SSFLASRKGS EGNCIAIARA
VHDAGGLLVM GSDSHISFSL GGFEQAILVI REAEFPEERL LNRSPQALLS FLSERGHDSL
DEYSVLLRS