| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1694 |
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| Symbol | |
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| ID | 6115935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2104132 |
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| End bp | 2106210 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633176 |
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| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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| Protein accession | YP_001760074 |
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| Protein GI | 170726048 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC AGACACAAGT TAAGCAAGCA GCAACAATGC CTAATTTCAT TCGAGGGATC
GACTTTATCT CAGCTCTGCT CTTAATCTTG GCTGCAAGTC CAGTACTGCT ACTCAAATAC
CTGTACAGAA AATTCAGATA TGGTGCAGCT ATTGAGCGTG TTTATATCTA TGGAGTGGAT
AACAAGCAAC TCAGTCTTTA CCAGTTTACT GGTGAAGGGA TCTGCTGTCA GTGGCCACAG
TTAATCAACC TACTCAAAGG CGATATCTCT CTATTAGGAA CAGAAAAGAG TTACATATTT
TCCCCTTCAC AGAGTAACAA GAGCGATACC GCTAACTCTT ATGCTACAAC ACAAGCCACC
TCAATTAAGC CTGGACTAAT ATCATTCAAA TTAATGCATC AACAGATGGG GCTCAGCTTT
GAAAACCAAG AGCTTGCCAT TATTCAAGCT CATAAAGGTG CGTTCTCTTA TCTCCTAGCT
CTAGCCCGTA CGTCTCTTAT CTGGTTATTA TCCAGTAAAC AAGCTAACCA AAATATCAGT
GATATTAATC TGTTCGATAT CAAGCTTTCT AATTTAAGCA TGACCGAGAT GTTAGCGCTG
ATTATCGAAA ATGCTCAAGA ACATCATAAA AAACAGCTAT CTCATGCTGG TTCATCTACA
GCAAAGGTCA ATCAGCATTT CAGCCAGTAC GCATTTGTTA ACGCTGATTG CATGAACATA
AGCACACAAA ACTCCCAATA CCGAGACTGC CTACAGACCT CCTGTGACAG GGTTTTTGCT
GACGGCTCAG GTATACGAAT TGCCAGCATC TGTAAGGGAG TCGCACCTAA AGATAACCTA
AATGGCACAG ATATGTTTCC AAGGCTATGT GAGCAAGCAG CCGATGCAGG TCTATCCATT
TTTCTACTGG GCGCCGACAA AGGCGTTGCT GCAACTGCCG CTCAGAATAT GCAACTTAAG
TACCCAAAAC TAAAAATTGC AGGTACTCAT CATGGCTTCA TCAGCGATCC TTTAGTCGAG
CAACAAGTGA TAGATAAAAT CAATCACTCC AAAGCCTCCA TACTGCTCGT CGCCATGGGC
GCACCAAAAC AGGAGTTATG GTTAGCAAAA CATAAGCATC AACTCGATGT TGGCGTTGGG
ATCGGAGTTG GCGGTCTGTT CGACTTCTAT GCAGAAAAGG TTAAACGCGC GCCATTATGG
GTAAGACAGA TGGGAATGGA GTGGATATGC CGTCTAAGTG AAGAGCCTAA AAGAATGTGG
AAACGATACA TCATAGGTAA TCCACTTTTT CTCTATCGCG TTTTTAAAGA GATACAATCT
CAGAAACATT TAGCTACCCA ACAAAAACAT CAAGCTAACC TCTCTGAGTT ATCCGCTCCA
CAGTGCCTAA TGGTGGAGAC ATCTAGGCTA ACTAATATGA AAGCAAATAA CCTCAGTGCC
ACTCATCGCT GTACACGTCA AAGACTACAG GGAAAAATCA CTGCACTCGT TAAGCGAGGT
TTTGACCTGA TAGCAGGCTC AATCATCTTA TTAAGTTTGA TCCCTTTTCT GCTTCTTGTT
GCCTTAGTGA TCCGCTTGGA ATCACCTGGC CCAGTACTCT TTAGCCAGCA AAGGGCTGGG
AAAGATAATG CCTCTTTTAC CATGTGGAAG TTTAGATCTA TGTATCTAGA TGCAGAGCAA
AGGCTAGCAA AGCTCAAAGC AGACAATGAG ATGAAGGGCG GCGTGCTATT TAAGATGAAA
CGAGACCCCA GAATCACCAA TGTCGGCAAA CTCATCCGTA AAGCTTCAAT TGATGAACTT
CCACAGCTAT GGAACGTTAT TTTAGGCGAT ATGTCTTTAG TTGGACCACG CCCAGCACTG
TTGACCGAAG TAGAGCAATA TTCAATGCAA GATAGAAAAA GACTGGCTGT CAAACCGGGA
ATAACCTGTA TTTGGCAGGT CAGTGGCCGC TCAGACATCC CTTTCGAACA ACAAGTTAAA
TTGGATGTGG ATTATATCTA TCAACAATCA TTACTCACCG ATATTTGGAT TTTAGTTAAG
ACCATTCCCG CTGTACTGCT CGCTAAGGGC GCTTATTAG
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| Protein sequence | MTTQTQVKQA ATMPNFIRGI DFISALLLIL AASPVLLLKY LYRKFRYGAA IERVYIYGVD
NKQLSLYQFT GEGICCQWPQ LINLLKGDIS LLGTEKSYIF SPSQSNKSDT ANSYATTQAT
SIKPGLISFK LMHQQMGLSF ENQELAIIQA HKGAFSYLLA LARTSLIWLL SSKQANQNIS
DINLFDIKLS NLSMTEMLAL IIENAQEHHK KQLSHAGSST AKVNQHFSQY AFVNADCMNI
STQNSQYRDC LQTSCDRVFA DGSGIRIASI CKGVAPKDNL NGTDMFPRLC EQAADAGLSI
FLLGADKGVA ATAAQNMQLK YPKLKIAGTH HGFISDPLVE QQVIDKINHS KASILLVAMG
APKQELWLAK HKHQLDVGVG IGVGGLFDFY AEKVKRAPLW VRQMGMEWIC RLSEEPKRMW
KRYIIGNPLF LYRVFKEIQS QKHLATQQKH QANLSELSAP QCLMVETSRL TNMKANNLSA
THRCTRQRLQ GKITALVKRG FDLIAGSIIL LSLIPFLLLV ALVIRLESPG PVLFSQQRAG
KDNASFTMWK FRSMYLDAEQ RLAKLKADNE MKGGVLFKMK RDPRITNVGK LIRKASIDEL
PQLWNVILGD MSLVGPRPAL LTEVEQYSMQ DRKRLAVKPG ITCIWQVSGR SDIPFEQQVK
LDVDYIYQQS LLTDIWILVK TIPAVLLAKG AY
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