| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1681 |
|---|
| Symbol | |
|---|
| ID | 6115922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2089556 |
|---|
| End bp | 2090434 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641633163 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_001760061 |
|---|
| Protein GI | 170726035 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.180776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA TTATTTTGGC TGGTGGAACC GGCACGCGTT TGTATCCGCT CACTAAAGTA
GTTAGTAAAC AGTTACTGCC TATCTATGAT AAGCCGATGA TCTATTATCC CCTTGCAACC
TTAATGAGTG CGGGTATTAG GGATATTTTG ATCATTACGA CCCCTGATGA TATAGAGAGT
TTTAAATCTT TATTGGGGAC AGGTTCAGAC TGGGGGGTGA GTATTGAATA TCAGATACAA
GTATCCCCTG ATGGTTTAGC TCAAGCTTTT TTACTGGGTG AGTCTTTTAT TGGTGATGAT
AGCGTGGCAC TTATATTAGG TGATAACCTG TTTTATGGTC ATGATCTGAT AAAATCCCTT
AAGCGTGCTG CCAAGGGCAA AGTTGGCGCA ACGGTATTTG GTTATCATGT CTCAAACCCT
TGTGATTATG GCGTTGTCGA GTTTGATAAT GAAAATCGTG TTATCTCAAT CGAGGAGAAG
CCTCAATCGC CTAAGTCTAA TTATGCGATT CCTGGGATCT ATTTTTTTGA TAATAAAGTC
ATTGATTTTG CTAAAAAGGT TACTCCTTCA GACAGAGGGG AGTTAGAGAT CACAGAGGTG
ATCGGTCAGT ATTTAGCTGC AGGTTTTCTG AATGTGGAGA TCATGGGTAG AGGGACTGCT
TGGTTAGATA CAGGCACTTA CGATAGCCTG TTACAGGCGG CTCAGTTTAT TGAAACTATC
GATAAACGCC AGGGGTTAAA GGTTAATTGT CCAGAAGAGA TGGCTTATCG TATGGGTTAT
ATCGATGATA AACAGTTATT GGCTTTAGCA GAGCCTTTAC GTAAAAGTGG CTACGGTGAG
TACCTGATTA GTATTCTGTC TCAGAGAGTT TTTTCATGA
|
|---|
| Protein sequence | MKGIILAGGT GTRLYPLTKV VSKQLLPIYD KPMIYYPLAT LMSAGIRDIL IITTPDDIES
FKSLLGTGSD WGVSIEYQIQ VSPDGLAQAF LLGESFIGDD SVALILGDNL FYGHDLIKSL
KRAAKGKVGA TVFGYHVSNP CDYGVVEFDN ENRVISIEEK PQSPKSNYAI PGIYFFDNKV
IDFAKKVTPS DRGELEITEV IGQYLAAGFL NVEIMGRGTA WLDTGTYDSL LQAAQFIETI
DKRQGLKVNC PEEMAYRMGY IDDKQLLALA EPLRKSGYGE YLISILSQRV FS
|
|---|
| |