| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1630 |
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| Symbol | fliR |
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| ID | 6115871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2020507 |
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| End bp | 2021292 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633113 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001760011 |
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| Protein GI | 170725985 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGACCT TAATGGATGC TATTGCATCC TATATGTGGC CATTATTCCG TGTCGCCAGT
ATGTTGATGG CAATGGCAAT TGTCGGTGCC AATACAACTC CGGTTCGAAT ACGACTGCTG
CTCTCGATGA CAATTACATT TGCCATCGCC CCAGTGCTTC CTCCCATGGA GAACGTTGAT
CTATTTTCTC TCTCATCAGG CTTTATTATT TTTCAGCAGA TAATCATTGG CGTGGCAATG
GGGTTTGTGA CTTTATTGGT TATGCAAACT TTTGTTCTAA CGGGTCAAAT AATTGGTATG
CAGACAAGTT TAGGTTTTGC GTCCATGGTT GATCCCTCAT CCGGTCAGCA AACACCTGTG
ATTGGTAACT TCTTTTTGCT GCTCACAACC ATGATATTTT TAGCTGTCGA TGGCCATTTA
GTCTTAATTC GTATGTTGGT TGTTAGCTTT GATACTATTC CCATTTCCGA CCAAGGGATC
AGTATTGCAA GTTATAAGCT ATTAGCGGAG TGGGGGGCAT ATATGTTTGG AGCAGCCTTA
ACGATGTCGA TGACGGCCAT TGTAGCCCTG CTTATGATTA ACCTCTCATT TGGCGTTATG
ACACGGGCAT CCCCACAGCT GAACATCTTT GCCATCGGTT TCCCAGTTAC TATGGTTACA
GGTTTATTTA TTCTATGGTT AACCTTAACA CCTATTATGG AGCACTTTGG CGCAGTATGG
CGCGATGCAC AGCTGCTTTT ATGTGACATC GTTGAACTTC AATGCAATGT CGATGGAAGG
TTTTAA
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| Protein sequence | MGTLMDAIAS YMWPLFRVAS MLMAMAIVGA NTTPVRIRLL LSMTITFAIA PVLPPMENVD
LFSLSSGFII FQQIIIGVAM GFVTLLVMQT FVLTGQIIGM QTSLGFASMV DPSSGQQTPV
IGNFFLLLTT MIFLAVDGHL VLIRMLVVSF DTIPISDQGI SIASYKLLAE WGAYMFGAAL
TMSMTAIVAL LMINLSFGVM TRASPQLNIF AIGFPVTMVT GLFILWLTLT PIMEHFGAVW
RDAQLLLCDI VELQCNVDGR F
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