Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1620 |
Symbol | |
ID | 6115861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2012071 |
End bp | 2013045 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633103 |
Product | flagellar assembly protein FliH |
Protein accession | YP_001760001 |
Protein GI | 170725975 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCCA ATAAACCTGA AGGTGAGAGC GAAGTTCACC CACCTGAAGC CGATATTGAG TTTAGCCATT GGCATATCCC GGATGTAACA ACAGCAGTTC CCGAAGATGT CTCTAATCTT TTTGGACGAA AAGCGGCTCA AAAACCTGTC ACGGAGGAAC CTGATTCAAT TTTACCTCCA ACCTTAGGGC AGATAGAGGA GATTAGGCAG GAAGCTGAAA ATGAAGGTTT TGCACAGGGA AAAGAGGAGG GGCATCAAGC TGGCCTCGAA ACTGGACGTT TAGAGGGGTT AAAGCAGGGC CATGATGAGG GATTCGAGCA GGGCAAAGAG CAAGGTTATC AAGAGGGGGC GGAGAAGGCA CTAGAGCTCA TCAAACGGTT TGAAGGTTTA CTTGAACAGT TTGAAAAGCC TCTTGAACTG CTTGACAATG AGATAGAGCA GGAGCTTGTA TCATTGACAT TAAAGCTATC TCGCGCAGTG ATTGGACATG AAATAAAAAC TCATCCAGAG CATATATTAT CTGCGTTAAG GCAAGGTGTT GACTCATTGC CTTTGAAAGA GCAAGGGGTT GTGATCCGCT TGCACCCAGA AGACCATGAG CTAGTTGGTT CGTTATACAG TGCCAATCAA TTAGAGAAAA ATCGTTGGGA TTTAGAGAGC GATCCAAGTT TGACTCCTGG CGATTGTATT ATTCTTAGTC AGCGGAGCAG TGTCGATATG CGACTTGAGA GTCGAATGAG CACTGTATTG CAGGAGTTAG AGAGTCATCA GCAGAATTTA AGCCAAACCG TTGAGCATCA AAAACAGGCC TTAGATATCG CCTCTGAAGC GAGTCAAGTG CTAGAAACAT TGCCTGAAGA GGAGCTCAAT GTTGAGACTC AACAGGAGAG CGATGGTGAA GTAACTGATG AGTCTCATCA TGTTGAAAAT AGCAAAGAAC AGAGCCCTGA TGACTCTCCT GATAAAGTGG ATTAA
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Protein sequence | MKSNKPEGES EVHPPEADIE FSHWHIPDVT TAVPEDVSNL FGRKAAQKPV TEEPDSILPP TLGQIEEIRQ EAENEGFAQG KEEGHQAGLE TGRLEGLKQG HDEGFEQGKE QGYQEGAEKA LELIKRFEGL LEQFEKPLEL LDNEIEQELV SLTLKLSRAV IGHEIKTHPE HILSALRQGV DSLPLKEQGV VIRLHPEDHE LVGSLYSANQ LEKNRWDLES DPSLTPGDCI ILSQRSSVDM RLESRMSTVL QELESHQQNL SQTVEHQKQA LDIASEASQV LETLPEEELN VETQQESDGE VTDESHHVEN SKEQSPDDSP DKVD
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