| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1582 |
|---|
| Symbol | |
|---|
| ID | 6115822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1972415 |
|---|
| End bp | 1973494 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641633064 |
|---|
| Product | N-acylneuraminate-9-phosphate synthase |
|---|
| Protein accession | YP_001759963 |
|---|
| Protein GI | 170725937 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2089] Sialic acid synthase |
|---|
| TIGRFAM ID | [TIGR03569] N-acetylneuraminate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.807685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAGA CATTTGTTAT TGCCGAAGCG GGCGTTAATC ATAATGGCGA TGAGAATTTA
GCCATCGAAC TCATCAATGT CGCCCATAAA GCAGGAGCTG ATGCCGTTAA ATTTCAAACT
TTTAATGCTA AAAGTTTAGT GACAGCCACA GCCAAGCAAG CTGATTATCA GATAAGCAAC
ACAAAAAAAG TCGAATCTCA ACTTACAATG TTAAGCCGCT TGGAGCTGTC ACACGACGCT
CATCAACGCC TAATTAATTA CTGCAACAAA CTTGGTATAC AGTTTCTTTC TACGGCGTTT
GACTCTGAAA GTTTATATTT TTTAGTTCAC ACACTTCAGC TCAAGACATT AAAAATTGCC
TCAGGTGAGA TCACCAATGC TCCCTTTATA CTTGAACATG CTCGTACAGG CTGCGATCTC
ATTCTATCTA CAGGTATGTC GACCTTAGCC GAGATTGAAT CAGCACTAGG GGTTATCGCA
TTCGGTCTAA CAACATCAAA CGATTCAACG CCAAGTATAG AGGCGTTTAC AGCAGCTTAT
ATGTCGCTAG AGGGGCAAAA AGCCCTAAAA GAAAAGGTCA GCTTATTGCA CTGCACTACC
GAATACCCTG CACCGTTTAA TGAGATAAAC CTCAAGGCAA TGGATACCTT AGCATCGGTT
TTTTCACTAC AGGTAGGTTA TTCAGATCAT AGTCAAGGGA TCACCATCCC CATCGCTGCA
GCAGCTCGCG GAGCCAGCAT CATTGAAAAG CACTTTACCT TAGATAACGA GATGTCAGGT
CCAGATCATA AGGCATCACT GGAACCTGAT GAACTAACGG CCATGGTTAC AGCGATTCGC
ACTGTAGAGG CGGCAATGGG AGATGGGGTT AAAACGCCTC AAGTCAGTGA ATTAAAAAAT
ATTAACGTTG CCAGAAAAAG CTTAGTGACA GTTAACCCCA TTCGAAAAGG TGACATTTTC
TCAACTGAGA ACCTAGCAGT TAAGCGACCC GGTACTGGCG CAAGCCCCTA CCTATATTGG
CAACGGCTCG GCACTAAAGC GGATAAAGAT TACGCTATCG GAGAGGTGAT TTTTGACTAA
|
|---|
| Protein sequence | MSKTFVIAEA GVNHNGDENL AIELINVAHK AGADAVKFQT FNAKSLVTAT AKQADYQISN
TKKVESQLTM LSRLELSHDA HQRLINYCNK LGIQFLSTAF DSESLYFLVH TLQLKTLKIA
SGEITNAPFI LEHARTGCDL ILSTGMSTLA EIESALGVIA FGLTTSNDST PSIEAFTAAY
MSLEGQKALK EKVSLLHCTT EYPAPFNEIN LKAMDTLASV FSLQVGYSDH SQGITIPIAA
AARGASIIEK HFTLDNEMSG PDHKASLEPD ELTAMVTAIR TVEAAMGDGV KTPQVSELKN
INVARKSLVT VNPIRKGDIF STENLAVKRP GTGASPYLYW QRLGTKADKD YAIGEVIFD
|
|---|
| |