| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1581 |
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| Symbol | |
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| ID | 6115821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1971784 |
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| End bp | 1972422 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633063 |
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| Product | sialic acid biosynthesis protein NeuD |
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| Protein accession | YP_001759962 |
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| Protein GI | 170725936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.295514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACTAAAC CTGTCATTTT ACTCGGCTCA GGAGGTCATG CGAGTGTACT CGCTGATATC
TTATTGCAAA ATAATCATAC AATTTTAGCG GTGATCAGCC ACAGTAAAAG TGCTCGCTCG
GTCTTTAATG AGATACAACA CTTTGATTCA GATAAAGATG TTTTACAATT CTCCCCTGAT
AAGGTTAAAT TAGTAAATGG CTTGGGCTCC TTACCTGGCC AAAGTTTACG TCATGAGATC
TTTGACTACT TTACGCAATC TAACTATCAA TTTGAAACTG TGATATCCCA AAATGCAATG
TTATCACCCT ATTCCACGAT TGGCGCAGGC TCGCAAATTT TCATGGGCGC GATCATACAA
ACTGGCGCAG TGATTGGTGA GAGTACAATC ATTAATTCAG GAGCGATTAT TGAGCATGAT
TGCCATATCG GCATGCACTG TCATATTGCC CCTGGAGCAA CAATCTGCGG AGACGTTCGC
ATTGGTGAAC ACACTCATGT AGCCACTGGT GCGAATATCA TACAAGGCGT CTCGATTGGA
AAACACTGCA TCGTTGCTGC AGGTGCTACG GTTACTAAAG ATATGCCTGA TAATTCGATC
GCTTATGGTT ATCGCAGTCA GATAGAGAAA AGGTCATAA
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| Protein sequence | MTKPVILLGS GGHASVLADI LLQNNHTILA VISHSKSARS VFNEIQHFDS DKDVLQFSPD
KVKLVNGLGS LPGQSLRHEI FDYFTQSNYQ FETVISQNAM LSPYSTIGAG SQIFMGAIIQ
TGAVIGESTI INSGAIIEHD CHIGMHCHIA PGATICGDVR IGEHTHVATG ANIIQGVSIG
KHCIVAAGAT VTKDMPDNSI AYGYRSQIEK RS
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