Gene Swoo_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1576 
Symbol 
ID6115816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1967757 
End bp1968296 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content44% 
IMG OID641633058 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001759957 
Protein GI170725931 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA AACTAAGCTA TTGGTTCAAG GTTAAGCGAA TTGGTCCAGA CATACCTCTA 
ACTCACCTCC TGTTGCACTC CAAACGGCTT GGTGCTTGGT TATGTCGGAA AAAATTTGCT
AAATTTGGCC ACAACAGTGC GATGAGACCA GGAAGCTATG CTATCTGTTG TGACCACATT
AGTATTGGTA ACGATGTCGT CATTAGGCCA GGAACTATGT TATTTGGATC AGAGCATGGT
GATAAATCTA TAAATATTAC TATCGAGGAC TTAGTCTTAA TCGGCTCAGG AGTTCATATC
TATACCGCAA ACCATGAGTT TAGCGATCCT CAGAAGCCTA TTTTCTCTCA AGGACATCAA
GCCCCCCAAG CTGTGAACGT ATGCAAAGGC GCTTGGATAG GCGCTAATGC CATCATTTTA
CCCGGTGTCA CCCTTGGTCA AAACAGTGTC ATTGGCGCTG GCAGTGTGGT GACTAAAGAT
GTCCCTCCCT TCTGCGTTGT AGCTGGCCAA CCTGCAAAAA TAATAAAACA GCTAAAATAG
 
Protein sequence
MFKKLSYWFK VKRIGPDIPL THLLLHSKRL GAWLCRKKFA KFGHNSAMRP GSYAICCDHI 
SIGNDVVIRP GTMLFGSEHG DKSINITIED LVLIGSGVHI YTANHEFSDP QKPIFSQGHQ
APQAVNVCKG AWIGANAIIL PGVTLGQNSV IGAGSVVTKD VPPFCVVAGQ PAKIIKQLK