Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1576 |
Symbol | |
ID | 6115816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1967757 |
End bp | 1968296 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633058 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001759957 |
Protein GI | 170725931 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGA AACTAAGCTA TTGGTTCAAG GTTAAGCGAA TTGGTCCAGA CATACCTCTA ACTCACCTCC TGTTGCACTC CAAACGGCTT GGTGCTTGGT TATGTCGGAA AAAATTTGCT AAATTTGGCC ACAACAGTGC GATGAGACCA GGAAGCTATG CTATCTGTTG TGACCACATT AGTATTGGTA ACGATGTCGT CATTAGGCCA GGAACTATGT TATTTGGATC AGAGCATGGT GATAAATCTA TAAATATTAC TATCGAGGAC TTAGTCTTAA TCGGCTCAGG AGTTCATATC TATACCGCAA ACCATGAGTT TAGCGATCCT CAGAAGCCTA TTTTCTCTCA AGGACATCAA GCCCCCCAAG CTGTGAACGT ATGCAAAGGC GCTTGGATAG GCGCTAATGC CATCATTTTA CCCGGTGTCA CCCTTGGTCA AAACAGTGTC ATTGGCGCTG GCAGTGTGGT GACTAAAGAT GTCCCTCCCT TCTGCGTTGT AGCTGGCCAA CCTGCAAAAA TAATAAAACA GCTAAAATAG
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Protein sequence | MFKKLSYWFK VKRIGPDIPL THLLLHSKRL GAWLCRKKFA KFGHNSAMRP GSYAICCDHI SIGNDVVIRP GTMLFGSEHG DKSINITIED LVLIGSGVHI YTANHEFSDP QKPIFSQGHQ APQAVNVCKG AWIGANAIIL PGVTLGQNSV IGAGSVVTKD VPPFCVVAGQ PAKIIKQLK
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