Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1573 |
Symbol | |
ID | 6115813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1963865 |
End bp | 1964434 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633055 |
Product | hypothetical protein |
Protein accession | YP_001759954 |
Protein GI | 170725928 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.36812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCTCA CCCACTCTAT CACTAAGCTA AGCCTGATTG GCTCACTACT ATTCGCTTCG AGTACTTCGG CAATGGAGAT CTCCGGCGTT CAGCTACCTG AGCAGATAAC CCTTGCTCAC ACTGAGTTGC AACTCAATGG CGCAGGTGTT CGCAGTAAAT TTTTTATTGA TCTCTATGTT GGCAGTTTAT ACCTAACAGC TGCCAACTCA GATCCCGCCC AAATTATCGA TGCAGATCAA TCGGCCATTC GCCTAAATAT CACATCAGGT ATGATCACAG CTGACAAAAT GCGCGATGCC ATTACTGAAG GTTTCGATGA TGCAACTGAG GGGAAAACTG CTGCGATCCA GTCTCAAATA GATGCCTTTA TGGCACTGTT TAGTGAAGAG ATTAAAGAGG GAGACCAGTT TACTCTCGCC ACCAGCAAAG CATCTGGTGT CACAGCTTAT AAAAACAATA TTGCCCAAGC CACTATTGAA GGTGAAGCAT TCAGGCAAGC ATTATTGAAA ATTTGGTTAG GTGATGAGCC AGCTCAAAGC AGCTTGAAAA AAGCGATGTT AGGCAAGTAA
|
Protein sequence | MSLTHSITKL SLIGSLLFAS STSAMEISGV QLPEQITLAH TELQLNGAGV RSKFFIDLYV GSLYLTAANS DPAQIIDADQ SAIRLNITSG MITADKMRDA ITEGFDDATE GKTAAIQSQI DAFMALFSEE IKEGDQFTLA TSKASGVTAY KNNIAQATIE GEAFRQALLK IWLGDEPAQS SLKKAMLGK
|
| |