| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1563 |
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| Symbol | |
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| ID | 6115803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1945345 |
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| End bp | 1946787 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633045 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001759944 |
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| Protein GI | 170725918 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA TTTTGCTTAC TTTACTGACA CTAACACTCC TGGCTGGCTG CCAGAGAGTC
GCTGTGGAGG AAACAAAATT AGTACCACCA GCGGTTGAAA AAACGGTACT GAACGTAGGC
ACCATCTATG GCTCCCAAAT CTATGTCACG ACAGGTCAAG GGGAAGCAGG TTTCGATTAC
GAGATGGCCA GCCGCTTTGC AGACCATCTA GAGTTAGAGT TGGCAATGAA GCCCTACTCT
AATATTAAAG AGCTTTACCA AGCCCTCAAC AGTGGTGAAG TCGACCTGAT TGCTGCAGGA
CTTGCCGACA CCCCCACCCG CAGAGAAAAC TTCAGGCTTG GCCCGCCTCT ATATCGGGTT
AATCAGGTGC TGGTTTATAA ACAAGGGACA CCTCAACCTA AAGATATCTC TCAACTTAAA
GATGAGATAA CAGTGATCAC AGACTCCTCA TTCGTAGACA CTCTATCTCA GCTACAGAAG
ATCTACCCCG AACTTGTGTG GGATCAAGAG CAAGATAAAG ACAACGAAGA GCTACTAGCC
ATGATAGCCA GAGGGGAGAT CAGCTACACC ATCGCTGACT CAACCACCTT TGAGATCAGC
CGCCGCTATA TGCCGGAGCT AAGAGCTGGT CTGACGCTAA AAGAGAAACA AGCGATTGTT
TGGCTACTGC CGGCACAAAA CAGCGACAAG CTAATGAGTG AACTGCTCAC TTTTTGGCAT
GGCGAGAAGC TCGACGGTAC TTTAGCTCAT CTCGATGAGA AATATTTTGC CCACGTCAAA
CGCTTCGATT ATGTCGATAC CCGTGCATTT CTCAGAGCTA TAGATAATAA ACTGCCTAAA
TATAAGGAAC GCTTTCAATA TTACGCAGGC GATCTCGATT GGAGAAAGCT CGCCGCTACT
GCCTATCAAG AATCACATTG GAACCCCAAT GCACGCTCAC CGACCGGTGT GAGAGGCTTA
ATGATGCTAA CACTGCCAAC GGCCAAACAG ATGGGGATTG AAAACCGCCT CGACGCAGAG
CAGAGCATTA AAGGGGGAGC GAAATACCTC AGAGGCATTC TTAATCGATT ACCTGACTCC
ATTCCCGACA ACCAGCGTAT GTGGTTTGCC TTAGCCTCCT ACAATATCGG TTACGGTCAT
GTTGAAGATG CCCGAAAATT AGCAGAGTCG ATGGGATTAA ATCCAAGTGC TTGGCGTGAT
CTAAAAGAGG TGCTACCTTT ATTACAGAAG CGAAAATATT ATAAACAAAC ACGTTACGGT
TATGCTCGCG GAAATGAAGC CGTGCACTAT GTTGATAATA TCAGGCGCTA CTATGATACC
TTGGTCTGGA TCGACAATCA GAATAAGTTA TTGGAAGAGA ATCAAGCCTT GATAGAGGAG
TCCCAACTTG CCGATCAGAT CGGAATTGGA GAGAAAGCGA TCACAGGCGC GCAACCAGAA
TAA
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| Protein sequence | MNRILLTLLT LTLLAGCQRV AVEETKLVPP AVEKTVLNVG TIYGSQIYVT TGQGEAGFDY
EMASRFADHL ELELAMKPYS NIKELYQALN SGEVDLIAAG LADTPTRREN FRLGPPLYRV
NQVLVYKQGT PQPKDISQLK DEITVITDSS FVDTLSQLQK IYPELVWDQE QDKDNEELLA
MIARGEISYT IADSTTFEIS RRYMPELRAG LTLKEKQAIV WLLPAQNSDK LMSELLTFWH
GEKLDGTLAH LDEKYFAHVK RFDYVDTRAF LRAIDNKLPK YKERFQYYAG DLDWRKLAAT
AYQESHWNPN ARSPTGVRGL MMLTLPTAKQ MGIENRLDAE QSIKGGAKYL RGILNRLPDS
IPDNQRMWFA LASYNIGYGH VEDARKLAES MGLNPSAWRD LKEVLPLLQK RKYYKQTRYG
YARGNEAVHY VDNIRRYYDT LVWIDNQNKL LEENQALIEE SQLADQIGIG EKAITGAQPE
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