Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1561 |
Symbol | |
ID | 6115801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1942215 |
End bp | 1944146 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633043 |
Product | acyltransferase 3 |
Protein accession | YP_001759942 |
Protein GI | 170725916 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATATC GTCCAGAAAT TGATGGTTTA CGTGCCCTTG CCGTGGTTCC TGTGATCTTG TTCCATGCAG GTTTCCATCA TTTTAGCGGT GGCTTTGTTG GTGTTGATGT ATTTTTTGTG ATCAGTGGTT ATCTCATCAC CAGTATTATT CTGGTAGAGA TGGAGCAGGG CAGGTTTAGC TTAGTTAACT TCTATGAGCG AAGAGCTAGG CGAATTCTGC CAGTGCTCTT TTTTGTTATG GCAGCCTGCT TTCCTTTTGC TTGGCTCTAT TTAATGCCCG TGGATATGAA GGATTTTATT CAAAGTATTT TGGCGGTTTC CACCTTTTCA TCAAATATTC TGTTTTGGCT TGAGAGTGAT TACTTCGATA CTGCCGCCGA GCTCAAACCT CTGCTTCACA CATGGAGCTT AGCGGTTGAG GAGCAGTACT ATATCTTCTT CCCGCTGTTT TTGATGTTCG GTTGGAAAAT GGGCAAAAGC TGGGTTGTAA CGGTACTTTT TCTGATTTTT TTAGCCAGTT TAGCCCTAGG TCATTGGGGG GCCTATAATA TGCCAACTGC CTCCTTTTAT CTGTTGCCAA CTCGAGGTTG GGAGTTACTT CTTGGTGTCT TTGCGGCTTT TTACTTGAGT CGACACACCC CTGTGCTTCC CTATCGCTGG CTTAACAATC TGCTGAGTTT ATTAGGATTT GCATTAATCT GTTTTGCGAC ATTTGCTTAT GATGAAACTG TGCCCTTTCC CAGCATGTAT GCATTGGTCC CCACCTTAGG CACCTTGCTT ATTATTGTGT TTGCTCAAGA GGGGACTCTG GTCAATCGAC TACTTAGCGT TAAACCCTTT GTCGGTATCG GTTTGATAAG TTATAGCGCC TACCTCTGGC ATCAACCCAT TTTTGCATTT GTGAAATATC GCAGTTTTAC TGAGCCTTCG ACGTTGCTGA TGTCCGGATT GTGTCTTGCC GTTGTGCTAT TAGCTTACTT AAGTTGGCGC TTTGTGGAGA AACCATTTAG GAACAAGACA GCTTATAGTC GCCGATTCAT TTTTACCTTC TCAGGCCTAG CTACCAGTGT ATTTATTGTT GTGGGTAGCG TGCTAAATTT GAGTGATGGC TTTAAGTCTC GTGAGATCTA TGCCGATTTA ATGGTGGGGG GCTACCAGCC TGATAATCGC GAGTTAGGCG CCAATAGTTG GAGTGAGCTG CGGACACTTA GTGGCGATGA AAACTATGGT GTAGATAAAA ACCCATTCGA TAGAGGCTTA TGGTTTGATG AGCTCGATGC CAGAGGGCGC TTACTGTTGG TGGGAAATTC TCACTCTAAA GATATGTTCA ATGTATTAAC GAGCAGTCAG CAGACGATGA AGCACTATCA GGTGGCACGC TTTGGCACTG AAATTTACAA TATTGGCGAT GACTTTTTTG CATCTCCAAA CTATCGCCTC GCAGATGTGA TCATGTTCGC TTCTCAATAT AAACCTATGG ATATTGACCG TTTTTCAGCT GTGATAGAGA GAGTCATGAC TGATGGAAAA CGGGTGGCTT TAGTTAAGAA TATCTACGAG TTCGAGGAGT TTGGGCACCG CACTTATGCT GATTTTCTAT TTAATCTACT GCTGCAAAAT GAAGGTCCGG AGAATATATC GCTCAGTGAT ATTGATAAAA TCAATCAAAA ACACTTCCAA CAATTTCAGC ACAGAGAGCC AGCTCAGTTT AGAAAGCAGC TCAATAAAAA AGTTGATGAT ATTGCACTCA GATATCAAGA GGTAGTGGTG CTAGATAGAA TGGATTATGT GTGCGATCGA ACTAAAGAGG TGTGTTATGC CATCACAGAG AACTATCAAA AACTGTTTTA TGATTATGGT CATCATACAT TAGCTGGAGC TAAGTTTTTT GGCGCGCGCA TCGATAGGGT GAACTGGTTG ATGGCTTTAT AG
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Protein sequence | MKYRPEIDGL RALAVVPVIL FHAGFHHFSG GFVGVDVFFV ISGYLITSII LVEMEQGRFS LVNFYERRAR RILPVLFFVM AACFPFAWLY LMPVDMKDFI QSILAVSTFS SNILFWLESD YFDTAAELKP LLHTWSLAVE EQYYIFFPLF LMFGWKMGKS WVVTVLFLIF LASLALGHWG AYNMPTASFY LLPTRGWELL LGVFAAFYLS RHTPVLPYRW LNNLLSLLGF ALICFATFAY DETVPFPSMY ALVPTLGTLL IIVFAQEGTL VNRLLSVKPF VGIGLISYSA YLWHQPIFAF VKYRSFTEPS TLLMSGLCLA VVLLAYLSWR FVEKPFRNKT AYSRRFIFTF SGLATSVFIV VGSVLNLSDG FKSREIYADL MVGGYQPDNR ELGANSWSEL RTLSGDENYG VDKNPFDRGL WFDELDARGR LLLVGNSHSK DMFNVLTSSQ QTMKHYQVAR FGTEIYNIGD DFFASPNYRL ADVIMFASQY KPMDIDRFSA VIERVMTDGK RVALVKNIYE FEEFGHRTYA DFLFNLLLQN EGPENISLSD IDKINQKHFQ QFQHREPAQF RKQLNKKVDD IALRYQEVVV LDRMDYVCDR TKEVCYAITE NYQKLFYDYG HHTLAGAKFF GARIDRVNWL MAL
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