Gene Swoo_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1549 
Symbol 
ID6115789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1928207 
End bp1928974 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content47% 
IMG OID641633033 
Productmethyltransferase type 11 
Protein accessionYP_001759932 
Protein GI170725906 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACTCG CTCTTCACGT CACTGCACCT TCAACTGCGT TATATACAGA TCTATCGGGC 
TATTATGATC TCATGTGTGC TGATATCGAT TACAAGGCCC AGAGTGACCA TATTCGTAGG
CTCAATAGAC TGTTTGGCAA TGGCGCTAGT ACTCACCTGG ATCTTGCATG TGGCACAGGC
CCCCATATTC GTCACTTTAT CGACTATGGC TTCCAAAGCT GCGGTTTAGA TATCAATCAA
CCTATGCTCG ACTTGGCACA AGTTCGCTGC CCAGAGGCCG AGTTTACTCT GCAGGATATG
TGCAGCTTTA GGGTGAATAA TCCGGTCGAT CTAATCACCT GCTTTCTCTA CTCTATCCAT
TACAACGATG GGATCTGTAA ACTCAAGCAG TGTCTCTCTA GCGTCTATAA CGCGCTCAGC
GAGGGGGGGA TATTTTGCTT TAATGCGGTG GAGAAAACCA AGATAGATAA CCGCGCCTTT
GTCAGACACA GCACTGAGTT TAACGACAGT CAGTTTACCT TCAGCTCGGG CTGGAATTAC
AGTGGCGCTG GTGAACGCCA ATCACTTAAG CTCAGTATCG AGAAAAGTAA CGAGCAAGAG
AGTCAAGTCT GGCAAGATGA ACACCCTATG GTTGCCGTGA GCTTTGATGA ACTCGAGCAG
CTACTATTAC CTCATTTTGA GGTGCATATC TTTGAGCATG ACTACGACAA GATAACTCCA
CTGCAGCCAA CTTCTGGCAA CGCCATATTT GTCTGCGTAA AACGATAA
 
Protein sequence
MSLALHVTAP STALYTDLSG YYDLMCADID YKAQSDHIRR LNRLFGNGAS THLDLACGTG 
PHIRHFIDYG FQSCGLDINQ PMLDLAQVRC PEAEFTLQDM CSFRVNNPVD LITCFLYSIH
YNDGICKLKQ CLSSVYNALS EGGIFCFNAV EKTKIDNRAF VRHSTEFNDS QFTFSSGWNY
SGAGERQSLK LSIEKSNEQE SQVWQDEHPM VAVSFDELEQ LLLPHFEVHI FEHDYDKITP
LQPTSGNAIF VCVKR