Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1541 |
Symbol | |
ID | 6115781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1919107 |
End bp | 1920228 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633025 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001759924 |
Protein GI | 170725898 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.865101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.656047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA AGAAAATCAA TTTATTGGAT CTTGACCGTA AAGGGTTAAG AGCATTATTC ACTGAAATGG GTGAGAAGCC GTTTCGTGCC GATCAATTGA TGAAGTGGAT TTATCATTTT GGCGTCAGTG ACTTTGACGA GATGAATAAT ATTAACAAAG CGCTGCGTGC GAAGCTTAAT GCCCGCTGTG AGATTGTTGC GCCTGAAATT TCCAGCTTTC AAAAGTCTGA AGATGGCACC ATTAAGTTTG CTATTAATGT TGGTCAAGGC CAGGAAGTTG AAACCGTTTA CATTCCAGAA GATGACAGAG CAACCTTGTG TGTTTCATCA CAAGTGGGTT GTGCTTTAGA GTGCACCTTC TGCTCGACTG CTCAGCAGGG CTTTAATCGT AACTTAACGG TTTCTGAAAT TATTGGTCAA GTTTGGCGTG TTGCGGACTT TATCGGTTTT GTGAAAGAGA CTGGCGAACG TCCTATTACT AACGTCGTTA TGATGGGAAT GGGTGAGCCA CTACTGAACC TAAAGAACGT GATCCCTGCA ATGGATATCA TGTTAGATGA TTTTGGTTTC AGCCTCTCTA AGCGCCGAGT GACGGTATCA ACTTCAGGGG TTGTACCAGC ATTGGATAAG TTAGGTGATG CTTTAGATGT TGCTTTGGCG GTAAGTATTC ATGCTCCTAA TGACGAACTG CGTGACGTGT TGGTTCCAGT CAATAAAAAG TATCCTTTAG AGGAGTTTTT AGGTGGGATC CGCCGTTATA TTGCTAAGTC GAACGCTAAC CGAGGACGTG TAACTGTTGA GTATGTCATG TTAGATCATA TCAATGACAG CACAGACCAA GCCCATGAAT TAGCTAAATT AATGAAAGAT ACCCCCTGTA AGATTAACCT TATTCCGTTT AATCCTTACC CTGGTTCACC TTATGGTCGC TCCTCTAATT CTCGTATCGA TCGTTTCTCC AAAGTATTGA TGGAGTACGG TCTAACAGTG ATTGTTCGCA AGACTCGTGG TGACGATATT GATGCTGCTT GTGGTCAATT GGCCGGTGAT ATCAGAGACA GAACTAAGCG TTTAGCGAAA AAACGCATGC AAGATAGCCA AATATCGGTC ACAATAAACT AA
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Protein sequence | MSEKKINLLD LDRKGLRALF TEMGEKPFRA DQLMKWIYHF GVSDFDEMNN INKALRAKLN ARCEIVAPEI SSFQKSEDGT IKFAINVGQG QEVETVYIPE DDRATLCVSS QVGCALECTF CSTAQQGFNR NLTVSEIIGQ VWRVADFIGF VKETGERPIT NVVMMGMGEP LLNLKNVIPA MDIMLDDFGF SLSKRRVTVS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDVLVPVNKK YPLEEFLGGI RRYIAKSNAN RGRVTVEYVM LDHINDSTDQ AHELAKLMKD TPCKINLIPF NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK KRMQDSQISV TIN
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