| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1513 |
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| Symbol | |
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| ID | 6115752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1889616 |
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| End bp | 1890521 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632997 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001759896 |
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| Protein GI | 170725870 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0153071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGATA AAGCAACCAT TCTGCTAGTC GATGATACTC GTACTAATAT TGAGTTATTA
GCTGGCTGTC TGCAAAAAAC CTATAACTTA AAGGTGGCAA TGAATGGCAA GCGTTGTCTA
GAGCTGGCTG AAAGTGAGCC TGTTCCTGAT CTAATACTGC TCGATGTGAT AATGCCTGAT
ATGGATGGTT ACGACGTCTG CCGCCAGCTA AAAGATAACT CTTCAACGAA AGATATTCCT
ATTATGTTTG TTACAGGAAA GGACAGTGAT GAGGATGAGG AGCTAGGGTT ACAGTTAGGA
GCTGTAGATT ATATTACTAA ACCCATTCGT CCCGCGATTG TAACTGCTAG AGTCGGGACA
CAAGTCATAT TGAAGCAGCA GAGTGATACT TTGCGAAGTA TGGCTTTGCA TGATCAACTC
ACCTCTTTGT TTAATCGTCA CTATCTGATT GAAGCTGCCA ATAGTAAAGT TGCGAGAATT
AAGCGTCATG GGGGAACACT CTCCTTGATG ATGATTGATA TTGATTACTT CAAGTTGGTC
AATGATAAGT TTGGACATCA AGCTGGAGAT ACCGTGCTTA GGGCTGTTGC GAGCGTGTTA
TCTAGCGGTA GTCGTAAAGA GGATGTTGTG GCGCGATTCG GGGGGGAGGA GTTTGTCGTA
TTACTCGATG ATTGTTCTAT CTTGGATGCC GATGATAAAG CCGAGCAGTT AAGGAGTTTG
ATAGAGCAAC TTATTCCGGA AGGTATCTCT GTTACAGCGA GTTTTGGTAT TGCGGAATTA
GATCCTGATG GCGAAACATT CGAACACCTT CTTGCACGAG CAGATCAGGC CGTGTATCTA
GCAAAAGAGC AAGGCAGAAA TTGTGTTGTT CAAGCTAAAA GTGAGCTGGA TATCAAAGAA
GATTGA
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| Protein sequence | MSDKATILLV DDTRTNIELL AGCLQKTYNL KVAMNGKRCL ELAESEPVPD LILLDVIMPD
MDGYDVCRQL KDNSSTKDIP IMFVTGKDSD EDEELGLQLG AVDYITKPIR PAIVTARVGT
QVILKQQSDT LRSMALHDQL TSLFNRHYLI EAANSKVARI KRHGGTLSLM MIDIDYFKLV
NDKFGHQAGD TVLRAVASVL SSGSRKEDVV ARFGGEEFVV LLDDCSILDA DDKAEQLRSL
IEQLIPEGIS VTASFGIAEL DPDGETFEHL LARADQAVYL AKEQGRNCVV QAKSELDIKE
D
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