Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1504 |
Symbol | fadE |
ID | 6115743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1875448 |
End bp | 1877685 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632988 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001759887 |
Protein GI | 170725861 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.135782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.786071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAA GAACAAGATT AAAAAAAGTA TTGCCTACAA TTTCTACCAC TGAACAAGAA GCACTCGACG CCGGCGATGT ATGGCTGGAA GGTTCGATTT ACCAAGGCGT TCCTGACTTT AATGCCTTAA AAAATATTCC TGTAGCAAAG CTCTCTGTTG ATGAACAAGC GTTTCTTGAT GGTCCAGTGG CAACACTGTT GGAGATGGTC GATAACTTTG CCATTCAAGG TGCTAAGCAC ATCCCTGATG ATGTACTGAC ATTTCTCAAA ACGAACAAAT TCTTCTCACT CATCATCCCC AAAGCTTATG GCGGACTAGA GTTTAGCCCC TATGCCAACT CAACAATTGT GGCAACAATA GCCGCTAAAA GTTCAGCTGT AGCCGTCACC GTCATGGTGC CAAACTCACT AGGTCCAGGT GAACTCTTAA TGCATTACGG CACCGATGAG CAGCGAGATT TCTGGTTGCC TCGCTTAGCC AATGGTTTAG AGATCCCCTG CTTTGCTTTA ACTAGCCCTG AAGCGGGCTC TGATGCTGGT GGGATCCCCG ATATCGGTAC CGTCACCTTT GGTGAATATG AAGGAAACCA AGTGCTTGGT CTGTCTGTCA CTTGGGATAA ACGCTATATC ACCTTGGCGC CTATCGCCTC AGTACTTGGA CTGGCATTTA AAGTTCAAGA TCCTAAAGGC CTACTAGGGG GAGATGAAGA TCTGGGGATC ACCTGCGCCC TTATTCCTAA AGCTCATCCA GGTGTTCAGT TGGGTAATCG TCACGATCCC ATGGGCGTTA ACTTCTATAA CGGTACAACC CGAGGAGAAG ATGTCTTTAT CCCTATGGAG TTCATCATAG GTGGACAGAA AAATATTGGC CGTGGTTGGG CCATGTTGGT GGCTTGTCTT GGCGCAGGAC GCGGGATCTC ACTGCCAGCT TTAGGTGCTT CTGTCAGCCA ATGCTCATTC AAATCTTCAG CTGAATACGC CGCGGTTCGT GAGCAGTTTG GTTTGTCCAT CGGCAAATTT GAAGGTATTC AGGAAAAACT CGCCGACATT GCAGGTAAAA CCTATCTGCA AGAATCAATG CGAGTACTCA CAACCGAAGG ACTGGGTATT GGCCTTAAAC CTTCTGTTGT CACCGCTATC GCGAAATACC ATATGACAGA GCTTGGCCGT GACATTCTAA ACTCAGCTAT GGACATTCAA GCTGGTAAAG CGATTCAACG CGGACCACAA AACACACTCG CATCAGGCTA TGTGGCACAA CCTATCGCAA TAACGGTAGA GGGCGCCAAC ATACTTACCC GTAACCTGAT GATCTTTGGC CAAGGCGTAA TGCGCTGTCA TCCATATCTA CAAAGCATGG TTGAAGCGAT CCACAGCGAT GACACTAATG CAGATAAAGT GTTTAACAGC ATCTTTGCGA AAACTGTCGG CTATAGCGTT AATAACTCAC TGCGTGCATT CCGATTAGGT CTGCTACCTT TTACGGCTCA AGCAACCTCG ACTCTGCCAG AGGTGATCCC ATACGAGAAG TCGGTCAATA AACTTGCCTC AAAACTTGCG GTGTATGCTG ACTTCTCACT TTTAGTCTTG GGCGGTAAGC TCAAACAAGC CGAGATGCTC TCGGCTCGCC TAGGTGACGT AATGAGTTAT CTATATGCAG CCATGGCATC AATTCGTTAT TACGAACAAA AGCTGCCAAA GGAGCAAAGA GAGCAAGCCG CTCCCTACTT CCATTACGCA ACTCGTTGGT CACTGTGCAA AGCGGAAGAG GCACTACTGG CTTTCCTTGA AAACTTCCCC TCATCAGCAA CTCGTAAACT GATGCGTCTA CTGACAGTCA CCTACTCGGC TAAAATGCCA AAAGTCAATG ATGACCTAGT CAGAGAACTT GCTGAGCAAG CTCAGCTAAA CACTGAGTTT AAGCGTAACT TAACCCATCT CATTAAACCT ATCCCTGGGG ATGGTAACGA CATAAACGAG CAAGCTTATC TTGCAAAAAT GGACTGTTTA CCGCTACTTG CCAAAGTGAA AAAAGGCCTA CGTAGTCGCC AGTTCAAGGC GGGAACTCGA TTCTCCATCA CCTTAGATGC GGCGTTAGAA GCTAAAGTCA TTGAACTGTC AGAGCATAAA CTTCTACAGG ACTACAACCT TAAACGTGAG CGAGCAATTC GTGTTGATGA GTTTGATTTT GATATGAATT TAATCACTGA AAAAGCAGAA CTAAAAATAG CTAACTAA
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Protein sequence | MSIRTRLKKV LPTISTTEQE ALDAGDVWLE GSIYQGVPDF NALKNIPVAK LSVDEQAFLD GPVATLLEMV DNFAIQGAKH IPDDVLTFLK TNKFFSLIIP KAYGGLEFSP YANSTIVATI AAKSSAVAVT VMVPNSLGPG ELLMHYGTDE QRDFWLPRLA NGLEIPCFAL TSPEAGSDAG GIPDIGTVTF GEYEGNQVLG LSVTWDKRYI TLAPIASVLG LAFKVQDPKG LLGGDEDLGI TCALIPKAHP GVQLGNRHDP MGVNFYNGTT RGEDVFIPME FIIGGQKNIG RGWAMLVACL GAGRGISLPA LGASVSQCSF KSSAEYAAVR EQFGLSIGKF EGIQEKLADI AGKTYLQESM RVLTTEGLGI GLKPSVVTAI AKYHMTELGR DILNSAMDIQ AGKAIQRGPQ NTLASGYVAQ PIAITVEGAN ILTRNLMIFG QGVMRCHPYL QSMVEAIHSD DTNADKVFNS IFAKTVGYSV NNSLRAFRLG LLPFTAQATS TLPEVIPYEK SVNKLASKLA VYADFSLLVL GGKLKQAEML SARLGDVMSY LYAAMASIRY YEQKLPKEQR EQAAPYFHYA TRWSLCKAEE ALLAFLENFP SSATRKLMRL LTVTYSAKMP KVNDDLVREL AEQAQLNTEF KRNLTHLIKP IPGDGNDINE QAYLAKMDCL PLLAKVKKGL RSRQFKAGTR FSITLDAALE AKVIELSEHK LLQDYNLKRE RAIRVDEFDF DMNLITEKAE LKIAN
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