Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1445 |
Symbol | |
ID | 6115685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1827634 |
End bp | 1828725 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632933 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001759832 |
Protein GI | 170725806 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC GCGAACATCA GATACTGGCA ATACTTAAAC AGAACCCGTT AATTGCACAA CAAGACCTTG CCGATCGACT TGGAATAAGT CGCTCCGCTG TTGCAGGGCA TATTATGAAC CTGACCCATA AAGGCATTAT TCGCGGCAAG GGCTATATTT TGGCTGAATC CCGTTATGCC GTGGTGGTTG GGGGGGCCAA TATGGATATC CTTGGTCGCC CTTTAGATAC GTTGCAAGTG GGGGATTCAA ATCCCGGTAG CGTGACCTGC TCTCCTGGTG GAGTGGGGCG AAATATTGCC GAAAACTTAG CCCGCTTAGG TTCTCAAACT CGGCTACTGA GTGCGGTGGG GAAAGATACC TATGGACAGG CTATCATCGA CCAGTGTCAG CAAGCGGGTA TCGATATGCA GGCCTGCTTG CAGTTAAAGG ATGCGTCAAC CTCTACTTAC CTGTCAGTGC TTGATGGTGA TAGCGATATG CATGTTGCTA TCAATGACAT GGCGATTTTA GATAGGTTGA GCGTCGAGTT ATTGAAGGCG CAGGAGGAGA TGCTAAGACG TGCAGATCTG CTTATTTTAG ATGCTAATCT TTCGGCGCCC GCTCTGGAGT ATCTGCTAAG CAACTTCTCC GACAGGCCGA TATTTGTCGA TACCGTCTCC TGTGCAAAAG CAAAGAAAAT CCAACCTTTT TTGAGCGCTA TTCACACCTT AAAGCCCAAT CTTAAAGAAG CTGAGCAGCT CTCTGGAATA AGCATCGCGA ATTATGGCGA ACTACCTAAG TTAGGTCATT GGTTTCATGA GCAGGGGGTG CAGCGCATCT TCTTAAGCTT AGGAGCCGAT GGGGTTTTTT ACAGTGATGG TCAAACTCAG GCGCTTATTC CCGCTGTCGA TGTCCCTATG GTCAATGCCA ATGGTGCCGG TGATGCTTTC CTTGCTGGCC TTGCCCATGG CTGGCTTCAG GATTGGGATA TCGAACAATC AACAAAATTT GCCATGGCTG CGGCCGTAGT GGCTTTGTCA CATCTTGCGA CCATCAACCC AAACATGTCT GAAATGTCAG TCAATCGTGT TATCAAGGAG TCTATATGTT AG
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Protein sequence | MTEREHQILA ILKQNPLIAQ QDLADRLGIS RSAVAGHIMN LTHKGIIRGK GYILAESRYA VVVGGANMDI LGRPLDTLQV GDSNPGSVTC SPGGVGRNIA ENLARLGSQT RLLSAVGKDT YGQAIIDQCQ QAGIDMQACL QLKDASTSTY LSVLDGDSDM HVAINDMAIL DRLSVELLKA QEEMLRRADL LILDANLSAP ALEYLLSNFS DRPIFVDTVS CAKAKKIQPF LSAIHTLKPN LKEAEQLSGI SIANYGELPK LGHWFHEQGV QRIFLSLGAD GVFYSDGQTQ ALIPAVDVPM VNANGAGDAF LAGLAHGWLQ DWDIEQSTKF AMAAAVVALS HLATINPNMS EMSVNRVIKE SIC
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